Rhizobium rhododendri: PR018_09070
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Entry
PR018_09070 CDS
T08971
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rrho
Rhizobium rhododendri
Pathway
rrho00470
D-Amino acid metabolism
rrho00550
Peptidoglycan biosynthesis
rrho01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rrho00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PR018_09070 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PR018_09070 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rrho01011
]
PR018_09070 (murD)
Enzymes [BR:
rrho01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PR018_09070 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rrho01011
]
Precursor biosynthesis
Amino acid ligase
PR018_09070 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
2-Hacid_dh_C
KARI_N
NAD_binding_2
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
WFS24621
UniProt:
A0ABY8IMF8
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All DBs
Position
complement(1846798..1848210)
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AA seq
470 aa
AA seq
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MIAVTTLKGKRVALFGLGGSGLATALALVAGGADVTAWDDNPDSVAKATAAGVPTADLRT
IDWPRLSSFVLSPGVPLTHPKPHWTVDLARSAGVEIIGDVELFVRERRVHAPDCPFIAIT
GTNGKSTTTALIAHILKSSGRDTQMGGNIGTAILTLDPPRAERYYVVECSSYQIDLAPTL
NPSAGILLNLTPDHLDRHGTMQHYADIKERLVAGSGTSIVGVDDSFSTVIADRIERAGGT
VMRISRRQVLSDGLYADGSRIVRASAGETAAIADLDGIQTLRGSHNAQNAAAAIAACLAV
GVSVEDIQSGLASFPGLKHRMQPVARRGTVVFVNDSKATNAEAAAPALSSYERIYWIAGG
LPKEGGIASLAPLFPRIAKAYLIGEAAPQFAATLGEAVPYEISGTLDRAVLHAAADAAMD
QGVSAAVMLSPACASFDQYKNFEVRGDSFVAHVSALEGITMLIGSPTGGA
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgatagcggtcaccacgctcaaggggaaaagggttgcgctgttcgggcttggcggctcg
ggcctcgccacggccctggcgctggtggctggcggtgctgacgtcaccgcctgggacgac
aatcccgacagcgttgccaaggcgacggccgccggcgttccgacggccgaccttagaaca
atcgactggccaaggctgtcgagcttcgtgctgtcgcccggcgtgccgctgacccatccg
aagccgcactggaccgttgacctcgcccggtcggcaggcgtcgagatcatcggcgatgtc
gaattgttcgttcgcgagcgtcgcgtgcacgcaccggattgcccgttcatcgcgattacc
ggcaccaacggcaaatcgacgacgacggcgctgatcgcccatatcctgaaatcgagcggt
cgcgacacacagatgggcggcaatatcggtaccgccatcctgacgctcgatccgccgcgg
gccgagcgctattatgtcgtcgagtgctcgtcctaccagatcgatctcgccccgacgctt
aacccctcggccggtatcctcctcaacctgacccccgatcatctcgaccggcatgggacc
atgcagcattacgccgatatcaaggagcgccttgtggccggcagcggtacgtcgatcgtc
ggcgtcgacgacagcttctcgacggtcattgccgaccgcatcgaacgcgccggcggcacg
gtgatgcgcatctctcgccgccaggtgttgtcagacggtctatatgccgacgggagccgg
attgtccgggcatcggccggagagacggccgccatcgccgatctcgacggcatccagaca
ttgcgcggcagccacaatgcccagaacgccgcagcggccatcgccgcctgcctggcggtg
ggcgtatccgtcgaggatatccagtccggccttgcgtcgttcccgggcctgaagcatcgc
atgcagccggtggcgcgtcgcggcactgtcgtgttcgtcaatgattcgaaggcgaccaac
gccgaggcagcggctccggccttgtcgagctacgagcggatctactggattgccggcggc
ttgccgaaagagggaggcatcgcttcgcttgcaccgctgtttccccgcatcgccaaggca
tatctgattggcgaggcggcaccgcagtttgcagccactctgggcgaggccgtgccatac
gagatttccggcacgcttgatcgcgccgttctgcacgcggctgccgatgcggcgatggat
cagggcgtcagcgctgctgtcatgctatcaccggcttgcgcaagtttcgaccaatacaag
aacttcgaggtcagaggggattccttcgtcgcacacgtgtcggcgctggaagggatcacc
atgctgatcggttcgccaacaggaggcgcatga
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