Rhizobium rhododendri: PR018_09315
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Entry
PR018_09315 CDS
T08971
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
rrho
Rhizobium rhododendri
Pathway
rrho02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rrho00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PR018_09315
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rrho02000
]
PR018_09315
Transporters [BR:
rrho02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PR018_09315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
ABC_ATPase
SMC_N
AAA
Rad17
AAA_22
ORC-CDC6-like
AAA_28
nSTAND3
AAA_25
NB-ARC
AAA_17
Rop
Motif
Other DBs
NCBI-ProteinID:
WFS21392
UniProt:
A0ABY8IC95
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All DBs
Position
1903120..1904181
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AA seq
353 aa
AA seq
DB search
MSFLRIDSVSKSFGPNTVVKDFNMGIEKGEFVSFLGPSGCGKTTVLRMIAGFETPTSGSI
LIGGKEQRDLKPNKRNIGMVFQAYALFPNMSVFDNVAFGLKVAGAPKAEIESRVKEMLSL
IRLDHLADRFPYQMSGGQQQRVALARALAVKPQVLLLDEPLSALDAKIRVSLREEIRLIQ
QKLGITTVFVTHDQEEALSISDRIVVMNAGRADQIGTPFEIYNHPATRFVASFVGTLNLI
EAKVVDPATNRISIGDQGVTLKQSVTAFKAGDTVSLALRPEAGSLSEGAKGDTSLTGDVT
SAHFLGSVIRTRMNVCGNTISFDMFNAPGKMPPAVGERVTLRFAAEDLLVIND
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcctcaggatcgattcggtcagcaagagtttcggcccgaacaccgttgtcaaa
gatttcaacatgggcatcgaaaagggtgagttcgtctcgttcctcggcccgtccggctgc
ggcaagacgacggttctgcggatgatcgccggcttcgagacgccgacttcgggctcgatc
ctgatcggcggcaaggaacagcgggacctgaagccgaacaagcgcaacatcggcatggtc
ttccaggcctacgccctgttccccaacatgtcggttttcgacaatgtcgccttcggcctg
aaagtcgccggcgcgccaaaagcggaaatcgaaagccgcgtcaaggaaatgctgtcgctg
atcaggctcgatcatctggccgaccgcttcccctaccagatgtccggcggccagcagcag
cgcgtggcgcttgcccgcgcgcttgccgtcaagccgcaggtgctgctgctcgacgaaccg
ctgtcggcgctggacgccaagatccgcgtgtcgctgcgcgaggaaatccgcctcatccag
cagaaactcggcatcaccaccgtcttcgtcacccacgaccaggaagaggctctctcgatc
tccgaccgcatcgtcgtcatgaacgccggccgcgctgaccagatcggtacgcccttcgag
atctacaatcacccggcaacgcgcttcgtcgcctccttcgtcgggacgctgaacctgatc
gaggcgaaggtcgtcgatcccgccaccaaccgtatctcgatcggcgaccagggcgtgacg
ctgaaacagtcggttaccgccttcaaggcaggcgacacggtgtcgctggcgttgcggccg
gaggcgggatcgctgtccgaaggtgccaagggcgatacctcgctcaccggcgatgtcacc
tcggcacattttctgggctcggtcatccgcacccgcatgaatgtctgcggcaacacgatt
tccttcgacatgttcaacgctcccggcaagatgccgccggccgtcggcgaacgcgtcacc
ctgcgctttgccgcggaagacctgctggtcatcaacgactga
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