Rhizobium rhododendri: PR018_12305
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Entry
PR018_12305 CDS
T08971
Symbol
odc2
Name
(GenBank) ornithine/lysine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rrho
Rhizobium rhododendri
Pathway
rrho00330
Arginine and proline metabolism
rrho00480
Glutathione metabolism
rrho01100
Metabolic pathways
rrho01110
Biosynthesis of secondary metabolites
rrho04148
Efferocytosis
Module
rrho_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
rrho00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PR018_12305 (odc2)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
PR018_12305 (odc2)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
PR018_12305 (odc2)
Enzymes [BR:
rrho01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
PR018_12305 (odc2)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WFS21951
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Position
complement(2538499..2539632)
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AA seq
377 aa
AA seq
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MTTQRIRDFLATRRPDGPCLVLDLDVVRDNFHAFRHAMPDSSIYYAVKANPAPEVLKLLA
GMGSNFDCASVAEVEMALDAGATPARISFGNTIKKERDIARAHALGVSLFAVDSHEEVEK
MARAAPGARVFCRVLTDGEGAEWPLSRKFGCVPQMAVDVLVYAHQLGLESYGVSFHVGSQ
MTKVDAWDSALADAKRVFVSLGKQGIHLQMVNMGGGFPTKYLRDVPAAEAYGKAINQSLR
DHFGNQIPKTIIEPGRGMVGNAGVIKAEVVLISKKSDNDEARWVFLDIGKFGGLAETMDE
AIRYPIRTERDGDEMEPCIIAGPTCDSADVLYEKNLYPLPLSLTIGDEVFIEGTGAYTTT
YSAVAFNGFDPLKSYVI
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaccactcagcgcatccgcgactttctcgcaacccgacgtcccgacggcccttgccta
gtgctggatctcgacgtggtccgcgacaattttcatgctttccgccacgccatgccggac
agctcgatctattatgccgtcaaggcaaacccggctcctgaagtgttgaagcttctggcc
ggcatgggctccaacttcgattgcgcgtctgtcgccgaagtcgaaatggcgctcgacgct
ggcgcaacgcctgctcgcatctctttcggcaacacgatcaagaaggaacgcgacatcgcc
cgtgcgcatgcactcggtgtcagcctttttgccgtggacagccatgaagaagtcgagaag
atggcccgagccgctcctggcgcccgcgtattctgccgtgtgctgacggatggcgaaggt
gccgaatggcctctgtcgcgcaagttcggctgcgttccgcagatggcagtcgacgtcctc
gtctatgcacatcagctcggccttgaatcctatggcgtgtcgttccacgtcggctcgcag
atgaccaaggtcgatgcctgggactcggctcttgccgatgccaagcgcgtgttcgtttcg
ctgggcaagcagggcatccacctgcagatggtcaacatgggcggtggatttccgaccaag
tacctgcgcgacgttcctgctgccgaagcctatggcaaggccatcaaccagagcctgcgc
gatcacttcggcaaccagatcccgaagacgatcatcgagccaggtcgcggcatggtcggc
aacgccggcgtcatcaaggcggaagtcgtgctgatctcgaagaagtcggacaatgacgaa
gcccgctgggttttcctcgacatcggcaagttcggcggtctcgccgagacgatggacgaa
gccattcgctatccgatccgcaccgagcgcgacggcgacgaaatggagccttgcatcatt
gccggcccgacctgcgattcggccgacgtgctctatgagaagaacctctatccgctgcca
ttgtctctgacgatcggcgacgaggtgttcatcgaaggcaccggcgcctatacgacgacc
tattcggctgtggctttcaacgggttcgacccgctgaagtcctacgtcatctag
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