Rhizobium rhododendri: PR018_14355
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Entry
PR018_14355 CDS
T08971
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
rrho
Rhizobium rhododendri
Pathway
rrho00020
Citrate cycle (TCA cycle)
rrho00640
Propanoate metabolism
rrho00660
C5-Branched dibasic acid metabolism
rrho00720
Other carbon fixation pathways
rrho01100
Metabolic pathways
rrho01110
Biosynthesis of secondary metabolites
rrho01120
Microbial metabolism in diverse environments
rrho01200
Carbon metabolism
Module
rrho_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rrho_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rrho00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PR018_14355 (sucD)
00640 Propanoate metabolism
PR018_14355 (sucD)
00660 C5-Branched dibasic acid metabolism
PR018_14355 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
PR018_14355 (sucD)
Enzymes [BR:
rrho01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
PR018_14355 (sucD)
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GFIT
Motif
Pfam:
Ligase_CoA
CoA_binding
Succ_CoA_lig
CoA_binding_2
DapB_N
Motif
Other DBs
NCBI-ProteinID:
WFS22322
LinkDB
All DBs
Position
complement(2955630..2956532)
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AA seq
300 aa
AA seq
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MSILINKDTKILVQGLTGKTGTFHTEQALAYHGTKMVGGINPKKGGETWSGSAGESLPIF
ATVAEGKEATGADASVIYVPPAGAAAAILEAIEAEIPLIVCITEGIPVADMIKVKARLDA
SKSRLIGPNCPGVMTPDECKIGIMPGSIFKKGSVGVLSRSGTLTYEAVFQTTNEGLGQTT
AVGIGGDPVKGTEFIDILEMFLADEETKSIIMIGEIGGSAEEDAAQFIKDEAKRGRSKPM
VGFIAGRTAPPGRTMGHAGAVISGGKGGAEDKIAAMEAAGIRVSPSPARLGKTLVEVLKG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtccattctgattaacaaagacaccaagatcctggttcagggtctgaccggcaagacc
ggcacgttccacacggaacaggcgctcgcctaccacggcaccaagatggtcggcggtatc
aacccgaagaagggtggcgagacctggagcggttcggccggcgaatccctgccgattttt
gcaaccgttgccgaaggcaaggaagcaactggcgccgacgcatcggtcatctacgtgccg
ccagccggcgctgccgcggccatcctcgaagccatcgaagccgagatcccgctgatcgtc
tgcatcacggagggcatcccggttgccgacatgatcaaggtcaaggctcgcctcgacgcc
tccaagtcgcgcctcatcggcccgaactgcccaggcgtgatgacgcctgacgaatgcaag
atcggcatcatgccgggctcgatcttcaagaagggctccgtcggcgtcctgtcgcgctcc
ggcacgctgacctacgaagccgttttccagacgaccaacgaaggcctcggccagaccacg
gctgtcggcatcggtggcgacccggtcaagggcaccgagttcatcgacatcctggaaatg
ttcctcgcagacgaagaaaccaagtcgatcatcatgatcggcgaaatcggcggttcggct
gaagaggacgcggcgcagttcatcaaggacgaggccaagcgtggtcgctccaagccaatg
gtcggcttcatcgctggccgcacggcccctcccggacgcaccatgggccatgccggcgcc
gtgatctctggcggcaagggtggcgcggaagacaagatcgctgcgatggaagccgcaggc
atccgtgtatcgccgtctccggcccgcctcggcaagacgctggttgaagtcctcaagggc
tga
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