Rhizobium rhododendri: PR018_14990
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Entry
PR018_14990 CDS
T08971
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
rrho
Rhizobium rhododendri
Brite
KEGG Orthology (KO) [BR:
rrho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rrho03021
]
PR018_14990
Transcription machinery [BR:
rrho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PR018_14990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
KORA
HTH_23
HTH_3
HTH_10
HTH_25
EccE
Motif
Other DBs
NCBI-ProteinID:
WFS22441
LinkDB
All DBs
Position
complement(3081910..3082773)
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AA seq
287 aa
AA seq
DB search
MTTMSADRRMIKIAMAAPYLERSEEHDLALRWKENDDRGARNKIATAHMRLVISMAGKFR
NFGLPMSDLVQEGYVGLLEAAARFEPEREVRFSTYASWWIRASIQDYILRNWSIVRGGTS
SAQKALFFNLRRLRAKLAKGDTQLTVQSIHQEIAAALGVSLNDVQVMDARLSGNDASLQA
PSISGDADSAERMDFLVSNEPLPDEQVTSMIDGERRRKWLAAALTHLNEREMKIISARRL
AEDGATLEELGADLGISKERVRQIESRAIEKLRSALVVADPHMAAFA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccatgtctgcagatcgacgcatgatcaaaatcgcaatggcggctccctatctc
gagcgaagcgaagagcacgatcttgcacttcgctggaaggaaaatgatgaccgcggcgcc
cgcaacaagattgcgactgcccatatgcgccttgtcatctccatggccggcaagttccgc
aacttcggcctgccgatgagcgacctcgttcaagaaggttacgtgggcctgctggaagcc
gctgcccgcttcgagcctgagcgggaagtgcgcttctcgacctatgcaagctggtggatc
cgcgcttctatccaagactacatcctgcgcaactggtcgatcgttcgcggcggcacgagt
tcggcccagaaagcgctgttcttcaacctccgtcggctgcgcgccaagctcgccaagggc
gatacgcagctgactgtccagtccatccatcaggaaattgctgctgctctcggcgtcagt
ctgaacgatgtgcaggtgatggatgcccgtctctccggcaacgatgcctctctgcaggcc
ccgtcgatctccggcgatgccgatagtgccgagcggatggattttctggtcagtaacgag
ccgctgccggacgagcaggtgacatcgatgatcgacggcgagcgccggcgcaaatggctt
gccgcagccctcacccatctgaacgaacgcgagatgaagatcatcagtgcccgtcgcctg
gctgaggatggtgcaactctcgaagaactcggtgccgatctcggcatttccaaagagcgt
gttcgccagatcgaaagccgcgccatcgaaaagcttcgcagcgcgctggttgttgccgat
ccgcacatggcggcatttgcgtaa
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