Rhizobium rhododendri: PR018_17655
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Entry
PR018_17655 CDS
T08971
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rrho
Rhizobium rhododendri
Pathway
rrho02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rrho00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PR018_17655
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rrho02000
]
PR018_17655
Transporters [BR:
rrho02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PR018_17655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
GH113
Gag_p6
Motif
Other DBs
NCBI-ProteinID:
WFS22914
LinkDB
All DBs
Position
complement(3663674..3665593)
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AA seq
639 aa
AA seq
DB search
MVTRRTFLGAIASTMLPTFSARAADRDIEPEYLRPWLDAAQMPAMADRLPDRPRVVQLKA
MGRQPGQYGGSVRTIIGGQSDLRFMTIYGYARLIGYDEKLQMQPDILESYDIEDDRVFTF
HLRPGHKWSDGAPFTVDDFRYWWEDVILNKQLTPGGGALELRPHGSLPKFEVIDSLTVRY
SWDKPNPNFLPIIAAPQPLVLAGPAHYLKQFHKKYQDEIRLSSLMKENHARKWQEMHIKM
GRAYRPENPALPVLDPWHNTTAPPAEQFVFERNPYFHRVDENGRQLPYIDRFVLNVSSSS
IIAAKTGAGESDLQATGIDFDDYAFLKDAEKRYPVKVNLWKMARGSRVALLPNLNCADKV
WREVFRDVRVRRALSMAIDRHEINMAAFYGLGAESADTVLPESPLFKPEDAKAWVNHDPA
QANALLDAAGLDKRNADGLRLLPDGRPMEITVETAGESTLDTDVMELVTDHWRKIGIAAF
TRSSQRDIFRSRAMGGRIMMSIWYGLDNGVPTADMNPGELAPTMDDQLQWPLWGMYYLSG
GSQGVAPDVPEAAQLNELLAQWGIAASFEERTEIWQKMLAIYTEQVFSIGLINGTLQPIL
HSRRLQNVPEKALYGFDPTCFLGIYMPDTFWLTEDHPRA
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
gtggtaacccgtcggacgttccttggtgcaattgcctcgaccatgctgccgacgttttcg
gcgcgcgctgcagatcgcgatattgagccggaatatcttcggccatggctggatgcagcc
cagatgccagctatggccgaccgcctgccggaccgccctcgggttgtccaactgaaggcg
atggggcgccagcccggccaatatggcggctcggtgcggaccatcatcggtgggcagagc
gatctccggttcatgacgatctacggctacgcgcgactgatcggctatgacgagaagttg
cagatgcaaccggacattctcgaatcctatgacatcgaagacgaccgggtctttaccttc
cacctcaggcccggccataaatggtcggacggcgcgccgttcaccgtcgacgattttcgc
tactggtgggaagacgtcatcctcaacaagcagctcactccgggcggcggcgccctggaa
ctgaggccgcatggcagcctgccgaagttcgaggtgatcgattccctgacggtgcgctac
tcctgggacaagccgaaccccaatttcctgccgatcatcgctgccccgcagccgttggtg
cttgccggccccgctcattacctcaagcagtttcacaagaaatatcaggacgagatcagg
ctgtcttcgctcatgaaggaaaatcatgcgcgcaagtggcaggagatgcacatcaagatg
ggtcgcgcctaccgtccggaaaatccggccctgccggtgctggatccctggcacaacacc
accgcgccaccggccgagcagttcgttttcgagcgcaacccgtattttcaccgggtcgac
gagaacgggcggcagcttccctatatcgaccgcttcgttctgaatgtcagttcgtcgtcg
ataattgctgccaagaccggtgccggcgaaagcgacctgcaggcgaccggcattgatttc
gacgattatgcgttcctgaaagacgccgaaaagcgctacccggtgaaggtcaacctctgg
aaaatggcgcgcggatcgcgcgtggcgctgctgccgaacctcaattgtgccgacaaggtc
tggcgcgaagtgttccgcgacgtcagggtacgccgggcgctgtccatggcgatcgaccgt
cacgagatcaacatggcggctttctatggcctaggtgctgaaagtgccgacaccgtgctg
cccgaaagcccgcttttcaagccggaagacgccaaggcctgggtgaaccatgacccggcc
caggccaatgccctgctcgatgctgctggcctcgacaagcgcaacgcagacggcctgcgc
ctgctgcccgacgggcggccgatggaaatcaccgttgagacagcgggcgaaagcacgctc
gacaccgatgtgatggagctggtcaccgaccactggcggaagatcggcattgcggccttc
acgcgctcctcgcagcgcgacatcttccgcagccgggcgatgggcgggcgcatcatgatg
tccatctggtacgggctcgacaatggcgtaccgacggcagacatgaaccccggcgaactg
gcaccgacgatggacgaccagcttcaatggccgctctggggcatgtactacctgtccggc
ggaagccagggggttgcccccgatgttcccgaggctgcgcagctgaacgaactcctggca
caatggggtatcgcggcctcattcgaggaacggacggaaatctggcaaaagatgctggcc
atctataccgagcaggtattttcgatcggattgatcaatggcaccctgcagccaatcctg
cactccaggcggctgcagaacgtgcccgaaaaggcgctctacggtttcgatccgacatgc
ttcctcggcatctacatgcccgataccttctggctgacggaggaccatccccgtgcttag
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