Rhizobium rhododendri: PR018_17725
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Entry
PR018_17725 CDS
T08971
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
rrho
Rhizobium rhododendri
Pathway
rrho03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rrho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PR018_17725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrho03400
]
PR018_17725
DNA repair and recombination proteins [BR:
rrho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
PR018_17725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
WFS22927
UniProt:
A0ABY8II11
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All DBs
Position
complement(3681216..3682022)
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AA seq
268 aa
AA seq
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MAKQPRYWKGYLKLSLVTCQVSLTPATTDNAKIRFNVINRKSGNRLESHYIDSGTGKPVP
DDQQVKGYERGDDDYIFLEDEEIEAVALESNRAISIDTFVPKNSIDWIYYDAPHFLAPED
KVGLEAFCVIREAMKASGVVGIARLVLNRRERAVLLEPSGNGIVLWTLRYGDEVREPDKS
FAVAEKPEAEALVLMKTLIEKRKVDWSPELTLDPIQDKLAALIKAKKKGRGKKPAPACKE
APATSGNVINIMDALKKSIEANQTPKGR
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaacagccccgatactggaaaggctatttgaaactctccctggtgacctgccag
gtatcgctgacgccggcgacgacggacaatgccaagatcaggttcaatgtgatcaatcgg
aagagtggaaaccggctggaaagccactacatcgattccggcaccggcaagcctgtgcca
gacgatcagcaggtgaagggttacgagcgcggcgacgacgattacatcttcctcgaggac
gaggagatcgaggctgtcgccctcgaaagcaatcgcgccatcagtatcgacaccttcgtg
ccaaaaaactcgatcgactggatctactacgacgctccgcattttctggcgcctgaggac
aaggtgggtctggaagccttctgcgtcattcgggaggccatgaaggccagcggggtggtc
gggatcgcgcgccttgtgctgaaccggcgcgagcgtgctgtgttgctggagccgagcggc
aacggcattgtcctctggacgctgcgttatggcgacgaggtgcgtgagccggacaaatcc
tttgcagtggcagaaaagccggaagcagaggcacttgtcctgatgaagacgctgatcgaa
aagcgcaaggtggactggtctcccgagttgacgctcgaccctatccaagacaaactcgca
gcattgatcaaggcgaagaaaaagggacgcggcaagaagccggcacctgcttgcaaagaa
gctcccgcgacatctggcaacgtcatcaacatcatggatgcgctgaagaagagcatcgaa
gcaaaccagacacccaaggggcgataa
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