Rhizobium rhododendri: PR018_17860
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Entry
PR018_17860 CDS
T08971
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rrho
Rhizobium rhododendri
Pathway
rrho03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rrho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PR018_17860 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrho03400
]
PR018_17860 (mutM)
Enzymes [BR:
rrho01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PR018_17860 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PR018_17860 (mutM)
DNA repair and recombination proteins [BR:
rrho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PR018_17860 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
WFS22954
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All DBs
Position
3706772..3707662
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AA seq
296 aa
AA seq
DB search
MPELPEVETVRRGLAPAMEGAVIERLELRRGDLRFPFPLEFAASIAGQRIASLSRRAKYL
LIDLDNGMTVVAHLGMSGSFRIEAGEAAVTPGDFHHPRSKNEVHDHVIFHLARNGEAMRV
VYNDPRRFGFMDIVARAEMAAHPFFRDLGPEPTGNALSPEGLAKRFSGKAQPLKGALLDQ
KTIAGLGNIYVCEALWRAHLSPLRASGTLSTKTGKPRETLVRLVACIRDVIADAIAAGGS
SLRDHIQTDGSLGYFQHSFSVYDREGEACRTEGCGGKVGRIVQAGRSTFYCATCQK
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattaccagaggtcgaaaccgtgcggcgtggccttgccccggcgatggaaggg
gcagtgatagagcggctggagctgcgccggggggacctgcgctttccgtttccgctagaa
tttgcagcatccatagcgggccagcggatcgcatccctttcgcgccgcgccaagtatctg
ttgatcgatcttgacaacggcatgaccgtcgtcgcccatctcggcatgtccggctcgttc
cgcatcgaggctggggaggcggccgttacgcccggcgactttcaccacccgcgctccaag
aacgaggttcacgatcacgtcatcttccacttggcgcgcaacggcgaggccatgcgtgtc
gtctacaacgatccacggcgtttcggtttcatggatatcgttgcccgggcggagatggct
gcacacccttttttccgcgatctcggtcccgagcccaccggcaatgcgctgagcccggaa
gggctggcaaagcgtttttccggcaaggcccagccgctgaaaggcgcgctgctcgaccag
aaaacgattgccggcctcggcaatatctatgtctgcgaagctctctggcgggctcacctg
tcgcctttgcgtgccagcggaacattgtcgacaaagaccggcaagccgcgcgagacgctg
gtgcggctggtggcctgcatacgtgacgtcatcgccgatgcgatcgctgccggagggtcg
tcgctgcgcgatcatatccaaacggacggttcgctcggctatttccagcattccttttct
gtctacgaccgggaaggcgaggcttgccggacagagggctgcggcggtaaggtcggccga
atagtccaggccggccgctctaccttctattgtgccacctgccagaaatga
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