Rhizobium rhododendri: PR018_18530
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Entry
PR018_18530 CDS
T08971
Name
(GenBank) glycoside hydrolase family 2 TIM barrel-domain containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
rrho
Rhizobium rhododendri
Pathway
rrho00052
Galactose metabolism
rrho00511
Other glycan degradation
rrho00600
Sphingolipid metabolism
rrho01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rrho00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
PR018_18530
09103 Lipid metabolism
00600 Sphingolipid metabolism
PR018_18530
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
PR018_18530
Enzymes [BR:
rrho01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
PR018_18530
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro2_C5
Glyco_hydro_2_N
Glyco_hydro_2
Glyco_hydro_2_N2
Invasin_D3
DUF4982
Motif
Other DBs
NCBI-ProteinID:
WFS25578
LinkDB
All DBs
Position
unnamed1:complement(152589..154862)
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AA seq
757 aa
AA seq
DB search
MRSVVSFNDTWTFHEGFAPGLTEALTAGQMVTLPHNAVDLPFNYFDEKSYQRAFTYQAVL
KWQPEFDGREVSLVFDGAMADSVVYLNGKEIVAHKDGYTPFEARLTDGLHQGDNLITVKI
DGSENPEIPPFGGRIDYLTYAGIYRDVWLKVTDTVSIGNIKIETGHVLSEAKSATVRCDF
SNPQGVAFNGTVTAAITDAAGKEIATASSETTGTSVTLAFANLTGLSLWDIDDPVLYTVA
VSLESDQGSDQVGTHFGFRTAEFTTEGFKLNGRKLKIRGLNRHQSYPYVGYAAGRSAQEL
DADIMKNTLKCNLVRTSHYPQSKWFLDRCDRIGLLVFEEIPGWQHIGGEEWKQESIQNVR
RMIERDWNHPSIIIWGVRINESKDSHDFYLETNRLAHELDSTRQTGGVRFILDSEFLEDV
FTMNDFILGNEELPGSNRPRTALRSQQECTGLQKVVPYLITEFGGHMYPTKIYDQEQRQA
EHVRRHLEVLNAAYGDPNISGAIGWCMFDYNTHKDFGSGDRICYHGVMDMFREPKFAAYV
YASQCEPSEEVVMKPVTFWARGERNIGGVLPLIILSNCDEIELRYGSLVKRVGPDRETFP
HLPHPPIVVDHRHFTKDELGVWGMQWEDAHFTGFVAGEAVAKLHMVADPLPTTLQVEADS
KTIRAEGRDSTRVIVRALDQVGSRLPFINDVVTLKVSGPAKIVGPHVIPFQGGTTGFWLE
STGKSGDITIEVTSPRFTGTTVELTAVNSTQQEAVTP
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgcgctctgttgtttccttcaacgatacctggacctttcacgagggtttcgcccctggt
ctcaccgaggccctgaccgccggccaaatggtcaccctgccgcacaatgcggtagacctg
ccgttcaactatttcgacgagaaatcctatcagcgcgccttcacctaccaggccgtcctg
aagtggcagccggagttcgacggtcgcgaagtgtcgctggtattcgacggcgccatggcc
gactccgtcgtttatctcaatggcaaggagattgtcgcccacaaggatggctacacgccc
ttcgaggcgcgcctgaccgacggtctgcatcagggcgacaacctgatcaccgtcaagatc
gacggcagcgaaaacccggaaatcccgcccttcggtggccggatcgattatctcacctat
gccggcatctatcgcgatgtctggctgaaggtcaccgatacggtgtcgatcggcaacatc
aagatcgagaccggccatgtgctcagcgaggcaaagtcggcgacggtgcgttgcgacttc
tccaatccacagggtgtggcgttcaacggcaccgtgaccgccgccatcaccgacgccgca
ggcaaggaaattgccacggcctcgtccgaaacgacaggcacaagcgtgacgctggccttc
gccaacctcacaggcctgtcgctctgggatatcgacgaccctgtcctctataccgtcgcc
gtctcgctcgagagcgaccagggctcggaccaggtcggcacgcatttcggcttccgcacg
gccgagttcacgaccgaaggcttcaagctcaatggtcgcaagctaaagatccgcggcctc
aaccgtcaccagtcctacccctatgtcggctatgccgccggccgctccgcccaggagctg
gacgccgacatcatgaagaacacgctgaagtgcaatctcgtccgcacctcacactatccg
cagtccaaatggtttctcgatcggtgcgatcgcattggcctcttggtgttcgaggaaatc
cccggctggcagcatatcggcggcgaggagtggaagcaggaatcgatccagaacgtccgc
cgcatgatcgagcgcgactggaaccatccgtcgatcatcatctggggcgtgcgcatcaac
gaatccaaggatagccacgacttctatctcgagaccaaccggctcgcccatgagttagac
agcacgcgccagaccggcggcgtccgattcatcctcgatagcgaattcctcgaagacgtc
ttcacgatgaacgactttatcctcggcaacgaggaactgccgggcagcaaccgcccgcgc
acggcgctgagaagccagcaggaatgcacgggcctgcagaaggtcgtgccatacctgatc
accgaattcggcggccatatgtatccgacgaaaatctacgaccaggaacagcggcaggcc
gagcatgtgcggcgccatctggaagtgctgaacgctgcctatggtgatcccaacatttcc
ggtgccatcggctggtgcatgttcgactacaacacccacaaggacttcggctccggcgac
cggatctgctaccatggcgtcatggacatgttccgcgaaccgaaatttgcagcctatgtc
tatgccagccagtgcgagccatcagaagaagtggtgatgaaaccagtcaccttctgggcg
cgtggggagcgcaacatcggcggcgtgctgccactgatcatcctcagcaactgcgacgag
atcgaattgcgttacggctcgctggtcaagcgcgtcggtcctgaccgcgagacgtttcca
cacctgccgcacccgcccatcgtcgtcgaccatcgtcatttcaccaaggacgaactcggc
gtctggggcatgcagtgggaagacgcccatttcactggatttgtcgccggcgaagccgtc
gcaaaactgcacatggtcgccgatccgctgccgacgacactgcaggtcgaagcggacagc
aagacgatccgtgccgaagggcgcgacagcacccgcgttatcgtccgcgcgctcgatcag
gtcggctcgcgcctcccgttcatcaacgatgtcgtgacactaaaggtgtctggtccggca
aagatcgtcggcccccacgtcattccgttccagggcggcacgaccggcttctggctggaa
tcgacaggcaagagcggcgatattaccatagaggtcacctcgccccgctttaccggcacc
acggtagaactcacggcggtcaactcgacccagcaggaagcggtaaccccatga
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