Rhizobium rhododendri: PR018_19400
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Entry
PR018_19400 CDS
T08971
Name
(GenBank) nucleoside-diphosphate sugar epimerase/dehydratase
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
rrho
Rhizobium rhododendri
Pathway
rrho00541
Biosynthesis of various nucleotide sugars
rrho00552
Teichoic acid biosynthesis
rrho01100
Metabolic pathways
rrho01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rrho00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PR018_19400
00552 Teichoic acid biosynthesis
PR018_19400
Enzymes [BR:
rrho01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
PR018_19400
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
RmlD_sub_bind
GDP_Man_Dehyd
CoA_binding_3
3Beta_HSD
PglD_N
NAD_binding_10
adh_short
CoA_binding
MdcE
Rho_N
GFO_IDH_MocA
KR
Sugarporin_N
Motif
Other DBs
NCBI-ProteinID:
WFS25736
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Position
unnamed1:complement(346434..348383)
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AA seq
649 aa
AA seq
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MVSADRLVLPFLALPRVTKRAFALLVDSSLCVLTVWFAYCLRLDGWVILEGVEWVPAFVS
LLLAIPIFIVLGLYRAIFRYAGLSAFMTVVKAVAIYGLAFMTIFTAISIPGVPRTVGILQ
PLLLLIAVGLSRMWTRYWLGNAYQRLLNRNSLAKVLIYGAGASGRQLAAALSNSSELNVV
GFLDDDRHLHGSIMAGLPIYDPADLPALVATGETRDVLLALPNATRQRRNEILEAIRKAR
VTVRTMPDLTALAQGRVAVSDLRELDIEDLLGRDVIAPDQALLDRNIRGKVVMVTGAGGS
IGSELCRQIVKNRPSSLLLVEQNEFGLYLILGELEKAALAIQDAEIRIIPFLASVRDGPR
LEQIMTAWKPSTVYHAAAYKHVPLVEYNPAEGIKNNVTGTVAAATAAQKAGVENFVLIST
DKAVRPTNIMGASKRLAEMVLQALDADRVTSGTTTSFSMVRFGNVLGSSGSVVPLFRQQI
RDGGPVTLTHPEITRYFMTIPEASQLVIQAGAMASGGDVFLLDMGEPVRIVDLARRMVEL
SGFSVLDDDNPEGDIELRITGLRPGEKLFEELLIGDNPQPTPHPRIMRAREDFLRWPELS
ERLAALEKALDENDIPLAQSILKMLVSGYAPNGDVVDLVFREREGEAAA
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggtatctgccgatcggctcgttctgccctttttggctttgccgcgcgtaacaaagcgc
gcctttgcactcctggtcgactccagcctttgtgtccttacggtgtggtttgcctattgc
ctgcggcttgacgggtgggtaatccttgagggcgtcgaatgggtccctgccttcgtttcg
ctcctgctcgcgatcccgatcttcatcgtgctggggctctaccgcgcgattttccgttat
gccggcctctcggcgttcatgacggtggtgaaggcggtggcgatatacggcctggccttc
atgacgatcttcaccgcgatcagcattccaggcgtgccgcgtaccgtcggcatattgcag
ccgttgctgcttctgatcgccgtcgggctgtcgcgcatgtggacacgctattggctcggc
aacgcttaccagcggcttctgaaccgcaattcgctggcaaaagtgttgatctatggcgct
ggtgcttccggaaggcagctcgccgcagctctgtccaatagctcggagctaaatgtcgta
ggctttcttgacgatgacaggcacctgcatggcagtatcatggccgggctgccgatctac
gatcccgccgacctgccggcactcgttgctaccggcgaaacacgcgatgtattgctggcg
ctgccgaatgccacaaggcaacgccgcaacgaaatcctggaggcgattcgcaaggcccgc
gtcaccgtccgcaccatgcccgacctgaccgccttggcgcagggacgtgtggccgtctca
gacttgcgtgaactcgatatcgaggatcttcttggccgcgatgtcattgcgcccgaccag
gctttgctcgaccgcaacatccgcggaaaggtcgtcatggtgaccggtgctggaggctcg
atcggcagcgagctgtgccgccagatcgtcaagaaccgcccctccagcctgctgctggta
gagcagaacgaattcggcctctatctcattttgggcgagctggaaaaggcggcgctggcg
atccaggatgccgagatccgcatcatcccttttcttgcctccgttcgcgacgggccgcgt
ctggagcagatcatgacggcgtggaagcccagcaccgtctatcacgctgccgcctacaag
cacgtgccgctcgtcgaatataaccctgccgagggtatcaagaacaacgtcaccgggacc
gtcgccgcagccacggcggcgcaaaaggctggcgtcgagaatttcgtcctcatcagcacg
gacaaggcggttcgtccgaccaatatcatgggcgcgagcaagcgactggcggagatggta
ctgcaggccctcgacgctgatcgcgtcaccagcggcacgaccacgagtttttcgatggtc
cgcttcggcaacgtgctgggctcatcgggttccgtcgtgccgctgtttcgccagcagatc
cgtgacggtggcccggttacgctcacccatccggagatcacccgctatttcatgacaatc
ccggaagcctcgcagctggtcatccaggccggcgccatggcctcgggcggggatgtcttt
ctgctcgacatgggagaaccggtccgcatcgtcgatctcgcccgccgtatggtcgagctc
tccggcttcagtgttctggacgacgataatcccgagggcgatatcgagttgcggattacc
ggcctgcgtcccggcgaaaaactcttcgaggaactgctgatcggcgacaacccgcagccg
acgccgcatccgcgcatcatgcgggctcgcgaggattttctcaggtggccggaattgtcc
gaacgcctggcggcgctggagaaggctttggatgaaaatgacattccgctcgcccagagc
atcctgaagatgctggtctccggctatgccccgaatggagatgtggtggacctggtgttt
cgcgaacgcgagggagaggccgccgcatag
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