Rhizobium rhododendri: PR018_24970
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Entry
PR018_24970 CDS
T08971
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rrho
Rhizobium rhododendri
Pathway
rrho02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rrho00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PR018_24970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rrho02000
]
PR018_24970
Transporters [BR:
rrho02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PR018_24970
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WFS26285
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All DBs
Position
pTi6.2:complement(25182..26759)
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AA seq
525 aa
AA seq
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MLSRRQFSLFTALSTGALMLGASPKTWAAVPQVARFRLPIDPEGLYNVQSISLVVSSVLG
NYLLETLIYMDETGKPQPWLAESWQASDDGKVVTFKLKGGKTFHDGTPFDAQAVKFLFDT
ILDPANASPSNGIIGPLSKVETPDSMTVVFTFAKPFAPFINLLGQSFFGFNSPAAVKAAG
AAYARHPVGTGPFMFDTWRPGSSIELVRNPNFKQFRPDAANQGLPHLDRVILNVMPEEGV
VSSALQTEELDAALLTADATKPFASDPLYKVISDQNAKNLMFMEFNYKKQPFGDRAFREA
LSYAIDRESVLAAAFGGNGKIALGPLSRGIPGYDDAVAQAHGTPYNAEKAKQLLDAAGWV
LSGSTRSKAGMPAKFTIRSYASSNTESALAVIQANLADVGIAVEVSTADWGTFYPGLLKP
DWDMDLNRWTWSDPSVLSQLFRSPGHRQLLPANAAIDQALDGADTALDPVKRLQFVSDAQ
KALLEDRLILPILTDWPITVVRTALEGYRVDYLGNLYAADLKMVG
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgcttagccgccgccaattttcgttgtttactgccttgtccaccggagcgctgatgctt
ggcgcgtcgcccaagacctgggcagcagtgcctcaagtggcacgttttcgcctcccgatc
gatccggaaggcctatataatgtgcaaagcatatcgctcgtcgtcagtagtgttctcgga
aactacctcttggaaacgctgatctacatggatgaaacgggaaagcctcagccttggctt
gccgaaagctggcaggcgagcgacgacggaaaggtcgtcacattcaagctgaagggcggc
aagacttttcacgacggcacgcccttcgatgcgcaggccgtgaagtttctcttcgacacc
atcctggaccctgcaaacgcgtcacccagcaacggcatcatcgggccgctctcgaaagtc
gagacgccagacagcatgacggttgtcttcaccttcgcaaagccatttgcgccgttcata
aacttgctcggccaatcttttttcggcttcaattcaccggccgcggtcaaggcagcaggc
gctgcctatgcgcgccatccggtcggcacggggcccttcatgttcgatacctggcgccct
ggctccagtatcgaacttgtcagaaaccccaatttcaagcagttccgcccggatgcagcg
aaccagggattgccccatttggaccgggtaatcctgaacgtcatgccggaagaaggcgtt
gtcagctccgcattgcagacggaagagctggacgcggctcttctgacagccgatgccaca
aagccttttgccagcgatccgctttacaaagtcatcagcgaccagaacgccaagaacctg
atgttcatggaattcaactacaagaagcagccatttggtgatcgggcattccgcgaagcg
ctgagttacgccatcgaccgggaatcggttctggcagcagccttcggcggcaatggcaag
attgcgcttgggcccctttcgcgcggcattccgggctacgacgatgccgttgcgcaggcc
catggaacgccttacaatgctgaaaaagcaaaacaattgctggacgcggccggttgggtt
ctgtcgggatctacccgctcaaaggctggcatgccggccaaattcaccatccgcagttat
gcctcgagcaatacagagagtgcccttgccgtcattcaagccaatctggccgatgtcggg
atcgccgtggaagtcagcacggcggattggggcacgttctatccgggtctcctgaagcct
gactgggatatggatctcaaccgttggacgtggtcggaccccagcgtgttgtcgcagctg
ttccgttcgcccgggcatcgccagttgctaccggccaatgccgcgatcgaccaggcactg
gacggggccgataccgcgcttgatcccgtcaagcgcctgcagtttgtgagcgatgcccag
aaagccctcctcgaggacaggctgatcctgccgattctgaccgactggccgattaccgtc
gtgcggactgccctggaggggtaccgcgtggactacctcggcaatctttatgctgccgat
ctgaaaatggtcggttga
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