Rickettsia rickettsii Sheila Smith: A1G_01950
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Entry
A1G_01950 CDS
T00604
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
rri
Rickettsia rickettsii Sheila Smith
Pathway
rri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A1G_01950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rri03019
]
A1G_01950
03009 Ribosome biogenesis [BR:
rri03009
]
A1G_01950
Enzymes [BR:
rri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
A1G_01950
Messenger RNA biogenesis [BR:
rri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A1G_01950
Ribosome biogenesis [BR:
rri03009
]
Prokaryotic type
rRNA processing factors
A1G_01950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
ABV75954
UniProt:
A0A0H3AU07
LinkDB
All DBs
Position
346629..348701
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AA seq
690 aa
AA seq
DB search
MNKKIIIDANFPSETRVVLLGQSNNIEDIEFQTTVRQQNKGNIYLAKVTRIEPSLQAVFI
EYGMDKSGFLPFSEIHPNYYNLPTSERNFPVNAFPEIALSNITVEDDKEKPAAIYDALVD
SEEIDLKTIEDLVESKFQSELNLEAADDIEMIQSGTPESNIPQYKQYKVQEVIRKNQILL
VQVTKEERGSKCAAFTTYISLAGKYCVLMPNKGSQNGISRKISNGEERKRLKDILNKIVS
GDKNAYSVIVRTAGRGSSTLDLKKDYNYLARLWNKIRKSTIKFPAPCFIHEEDGIIRKTI
RDMCDHNVKEVVIQGQEGYEDASKFMQDLLPSELVKLKEHKSKTPIFTKFQVEEQLVKLY
QPVVTLPSGGYIVINPTEALIAIDVNSGKSTSEQNIEETALKTNLEAAQEVAKQVKLRDL
SGLIVVDFIDMSEAKNRKIIERSFKEFLSRDRARIQTGNISQFGLLEFSRQRLRSSFLET
NSAICSHCNGKGVIRASDANAMLILRTIENEIFEERIDVINVFTNIVSVIYLLNNKRAEI
KFIEEKYNIKLNFYSDPHATSDSYSIEKVKLFKKNNNNFNSVKPVIQNHNSDYTEEELKK
EQLRKNKHKWKTANNSNNVANEVKDKSLEAEESVEQTVSVVEEVKVVESNAGLEEAQAAP
KKTKRRYRNKTSNKKCPSNTVEDTEKNAES
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaagattataattgatgctaattttccaagcgaaacaagagtagttttatta
ggacaaagcaacaatatagaagatattgaatttcaaacaaccgtaagacaacaaaataaa
ggtaacatttatttagcaaaagttacaagaatagaaccgtcgctacaagctgtttttata
gagtacggaatggataaaagcggttttttaccgtttagtgaaatccatcctaactattac
aatttgcctacctcggagagaaattttccggttaatgcttttcctgaaatagctctttca
aatattacggttgaggatgataaagagaaaccagctgctatatatgatgctttggttgat
agtgaagaaattgacctaaaaaccatagaagatttagtagagagtaaattccagtcagaa
cttaatttagaagcggctgatgatattgaaatgattcaaagcggtacccctgagtcaaat
attccgcaatataaacaatataaagttcaagaagtaataagaaaaaaccaaatattatta
gtgcaggttactaaggaagaacgaggaagtaagtgcgccgcttttactacttatatatcc
ttggctggtaaatattgtgttttaatgcctaataaaggttcgcaaaacggtatatcgcgt
aaaatatcaaacggggaagaaagaaaaagactgaaagatattttaaataaaatagtaagc
ggtgacaaaaatgcttatagcgtcattgttagaaccgcaggtagaggaagtagcacctta
gatttaaagaaagactataattatttagcaaggttatggaataaaattcgtaaaagtact
attaaatttccggctccgtgttttattcatgaggaagatggtataatacgtaaaaccata
cgtgatatgtgcgatcacaatgttaaagaggtggtaattcaaggacaagagggttatgaa
gacgcttcaaaatttatgcaggatttattaccttcagagcttgtaaagctgaaagagcat
aaaagtaaaactcctatatttactaagtttcaagtagaagagcaattagttaaattatat
cagcctgtagtgacgttaccttcaggaggatatatcgttattaatcctacggaagctctt
attgcaattgatgtaaattccggtaaatcaacttctgaacaaaatattgaagaaacggca
ctaaaaactaatttagaagcagcccaagaagtagcaaagcaagtaaagcttagagatcta
tcaggtttgatagttgttgattttatagacatgagcgaagctaagaatcgtaaaattatt
gaacgatcctttaaagagtttttaagtcgtgatcgtgctcgtatacaaaccggtaatatt
agtcagtttggactacttgaattctcaaggcagagattacgttcttctttcttagaaact
aattcggcaatttgttctcattgtaacggtaaaggagtcattagagcaagtgacgctaat
gctatgttaattttacgtactatagagaatgaaatttttgaagaaagaattgatgtaata
aatgtttttaccaatatcgtttcagttatttatctacttaataataaacgtgctgagata
aaatttattgaagaaaaatataatataaaacttaatttttattccgatcctcatgctaca
tcagatagttattcgattgaaaaagtgaagttgttcaagaaaaataacaataattttaat
tctgttaagccggtaattcagaatcataattccgattatactgaagaagagctgaaaaaa
gaacagttacgcaaaaataaacataaatggaaaacagctaataatagtaataatgttgct
aatgaagtaaaagataagagtttagaggcagaagaatcggtggagcaaaccgtaagcgtt
gtggaagaggtgaaagttgtagaaagtaatgccggcttagaagaagcacaagctgctcca
aaaaagacaaaacgtagatatcgtaataaaacatcaaataagaaatgtccttctaatacc
gtcgaagatacggaaaagaatgcagagtcttga
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