Rickettsia rickettsii Sheila Smith: A1G_05435
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Entry
A1G_05435 CDS
T00604
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rri
Rickettsia rickettsii Sheila Smith
Pathway
rri03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rri00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A1G_05435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rri03021
]
A1G_05435
03400 DNA repair and recombination proteins [BR:
rri03400
]
A1G_05435
Enzymes [BR:
rri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A1G_05435
Transcription machinery [BR:
rri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A1G_05435
DNA repair and recombination proteins [BR:
rri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A1G_05435
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
IDH
Par3_HAL_N_term
Motif
Other DBs
NCBI-ProteinID:
ABV76570
UniProt:
A8GT45
LinkDB
All DBs
Position
complement(918360..919382)
Genome browser
AA seq
340 aa
AA seq
DB search
MLSLSKNWNTLIKPNKVAYENFPETNNKAKIVVEPLERGFGLTLGNAMRRVLLSSLQGAA
ITSIKIPAIEHEFSSIPGVKEDVSEVILNIKGIEVKMHVAEKRIMKLKATGPCVVTAGMI
ETGHDVEILNPDHVICDLAKDKQLEMELTCKVGKGYVLSTNNYEDNLPIGEIAIDALFNP
VKSVTYKVENTRVGQVTDYDKLIMFVETNGAVLPEMAVGLAARILQEQLQLFISFEEQEE
DKQVKTDALPFSPYLLKRVDELELSVRSANCLKNDNIIYIGDLVKRTEADMLRTPNFGRK
SLNEIKEILAKFNLRFGMDVPDWPPENMQELSKRYEDSYN
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgttaagtaaaaattggaatactttaataaagccgaataaagttgcttatgaa
aattttccagaaaccaataataaagctaaaattgtagttgaacctttagaaagaggtttt
ggtttaacactcggtaatgctatgagaagagtattactttcttctttacaaggagcagct
atcacgtctataaagatccctgctatagaacatgaattttcttctatacccggtgtaaaa
gaagatgtatcagaagtgattttaaacattaaaggtattgaagtaaaaatgcatgttgca
gaaaaacgtatcatgaaattaaaagcaacaggaccttgtgttgtaacggccggtatgatt
gagacaggtcatgatgtagaaatactgaatccggatcatgtaatttgtgatctagctaag
gacaagcagcttgaaatggaattaacttgcaaggttggtaaaggatatgtacttagcaca
aataattatgaggataatttacctattggtgaaatagctatagatgctttatttaatccg
gtaaaaagtgttacttataaggtagaaaatactagggtaggtcaggttaccgattatgat
aaattaattatgtttgtagaaactaacggtgctgtattacctgaaatggctgtaggttta
gctgcacgtattttacaggagcaattacaattatttatttcttttgaagaacaggaagaa
gataagcaagttaaaactgatgctttaccattttcaccttatttacttaagagagttgat
gaattggaattatcggttagatcggcaaattgtttgaaaaatgataatataatatatata
ggggatctagtaaaaagaacggaagccgatatgctaagaactccaaatttcggtagaaaa
tctttaaatgagattaaagaaatattggcaaaatttaatttaagattcggtatggatgta
ccggattggccaccggaaaatatgcaggaattatctaaacgttatgaagattcttataat
taa
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