Rickettsia rickettsii Sheila Smith: A1G_06305
Help
Entry
A1G_06305 CDS
T00604
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rri
Rickettsia rickettsii Sheila Smith
Pathway
rri00260
Glycine, serine and threonine metabolism
rri00460
Cyanoamino acid metabolism
rri00630
Glyoxylate and dicarboxylate metabolism
rri00670
One carbon pool by folate
rri00680
Methane metabolism
rri01100
Metabolic pathways
rri01110
Biosynthesis of secondary metabolites
rri01120
Microbial metabolism in diverse environments
rri01200
Carbon metabolism
rri01230
Biosynthesis of amino acids
rri01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
A1G_06305 (glyA)
09102 Energy metabolism
00680 Methane metabolism
A1G_06305 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
A1G_06305 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
A1G_06305 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
A1G_06305 (glyA)
Enzymes [BR:
rri01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
A1G_06305 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
DUF1815
DUF5770
Motif
Other DBs
NCBI-ProteinID:
ABV76714
UniProt:
A8GTI9
Structure
PDB
LinkDB
All DBs
Position
complement(1046485..1047747)
Genome browser
AA seq
420 aa
AA seq
DB search
MNIFNNNLHETDKEINEIIKHEKLRQSSVIELIASENFVSPAVLEAQGALLTNKYAEGYP
SKRFYNGCEEVDKAENLAIERVKKLFNCKYANVQPHSGSQANQAVYLALLQPGDTVLGMS
LDSGGHLTHGAAPNMSGKWFNAVSYSVNKETYLIDYDEIERLADLHKPKLLIAGFSAYPR
NIDFAKFREIVDKVGAYFMADIAHIAGLVATGEHQSPIPYAHAVTSTTHKTLRGPRGGLI
LSNDEEIGHKINSALFPGLQGGPLMHIIAAKAVAFLENLQPEYKSYIQQVISNAKALASS
LQERGYDILTGGTDNHIVLVDLRKDGITGKLAANSLDRAGITCNKNAIPFDETSPFITSG
IRLGTPACTTRGFKEKDFVLVGHMVADILDGLKNNEDNSALEQQVLNEVTKLIELFPFYG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttttaataataatttacacgaaacggataaagagattaatgaaataataaag
catgaaaagctacgtcaaagtagtgtaatcgagcttattgcatcagaaaatttcgtaagt
cctgctgtgcttgaagctcaaggggcgcttctgactaacaaatatgccgaaggataccca
agtaagcgattctataacggttgcgaggaagtagataaagctgaaaatttagctatagaa
cgagtaaaaaaactctttaactgcaaatatgcaaatgtccaacctcattcaggatcacaa
gcaaatcaggctgtatatcttgctttattacagccgggtgatacggttcttggtatgtcc
ttagatagcggcgggcatctaactcacggtgcagcgcctaatatgtctggtaaatggttt
aacgccgtttcttatagcgtaaataaagagacttatttaatcgattatgatgagattgaa
cgcttagcggatttgcataaaccaaaattacttatagccggtttttctgcttatcctcgt
aatattgattttgcaaaatttagagaaatcgtggataaagtaggagcttactttatggca
gatattgctcatattgcaggacttgttgccacaggtgagcatcaaagccctattccttat
gctcacgctgttacctctactactcataaaacacttagaggtccaagaggtggtttaatt
ttatctaacgatgaagagataggtcacaaaataaattctgcattatttccaggactacaa
ggtggtccgttaatgcatataatagctgcaaaagccgtagcttttttagaaaatttgcag
cctgaatataaaagttatattcagcaggtaataagtaacgctaaagctttagcaagtagc
ttgcaagaaagaggatatgatatattaacaggtggtaccgataatcatattgttttagtg
gatttgcgtaaagacggaatcactggtaagcttgccgcaaattctttggatagagcaggg
attacgtgtaataagaatgctatcccgtttgatgaaacttcgccttttatcacttcaggc
attcgccttggtactcccgcatgtactactagaggctttaaagaaaaggattttgtatta
gtcggtcatatggtagcagatattttagacggcttaaaaaataatgaagataatagcgct
cttgagcagcaagtattaaatgaagtgacaaaattaattgaattatttccgttttatggc
taa
DBGET
integrated database retrieval system