Rickettsia rickettsii Iowa: RrIowa_1223
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Entry
RrIowa_1223 CDS
T00643
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rrj
Rickettsia rickettsii Iowa
Pathway
rrj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rrj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RrIowa_1223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrj03400
]
RrIowa_1223
Enzymes [BR:
rrj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RrIowa_1223
DNA repair and recombination proteins [BR:
rrj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RrIowa_1223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ABY72991
UniProt:
B0BUT1
LinkDB
All DBs
Position
963039..963821
Genome browser
AA seq
260 aa
AA seq
DB search
MKIATWNINSIKTRLNLLRNFLSKENPDILLLQEIKCETAKFPFDALSDLPYNSYVHGQK
SYNGVAIISKFPVDEIIKDFPNNYCSDQARFLEIKLSLPIGFCNIISLYAPNGSFVGSDK
FVAKLAFYDNFINYLSTKKSFDEKTIIGGDFNIAPFDIDVYSPKLLAETTCFTEVEQKKL
RTILNSGFEDLYRLMHPSKQEFSWWDYRARCFEQNKGMRIDMILGCNNTIDYLENCYMDY
NLRTQEKPSDHIPVIASFKG
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagctacttggaatattaattccataaaaacaagacttaatttattgcgtaat
tttttatctaaagaaaatccggatattttattattgcaagaaataaaatgcgaaaccgca
aaatttccttttgatgcattatccgatctaccttataattcttatgttcacggacaaaaa
tcatataacggcgttgctataatttcaaaatttcctgtcgatgaaataattaaggatttt
ccgaataattactgtagtgatcaagcaagattcttagaaataaaattatcattacctata
gggttttgtaatataatctcgctctatgctcctaacggttcatttgtcggtagcgataaa
tttgtagcaaaactagcattttatgataattttatcaattatctatcaactaaaaaatct
tttgacgaaaaaactatcataggcggtgatttcaatattgcaccgttcgatatagacgta
tattcacctaagctactggctgaaactacgtgttttactgaggttgaacaaaaaaaatta
cgcactattctaaattccggatttgaggatttatacagattaatgcatccgagtaaacaa
gaattttcatggtgggattatagagccagatgttttgaacaaaataaaggtatgaggatt
gatatgattcttggttgtaataatactattgactatttagaaaattgctatatggattat
aatttaaggactcaagaaaaaccttcagatcatataccggtaattgcgagttttaaggga
tag
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