Rickettsia rickettsii Iowa: RrIowa_1353
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Entry
RrIowa_1353 CDS
T00643
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rrj
Rickettsia rickettsii Iowa
Pathway
rrj00260
Glycine, serine and threonine metabolism
rrj00460
Cyanoamino acid metabolism
rrj00630
Glyoxylate and dicarboxylate metabolism
rrj00670
One carbon pool by folate
rrj00680
Methane metabolism
rrj01100
Metabolic pathways
rrj01110
Biosynthesis of secondary metabolites
rrj01120
Microbial metabolism in diverse environments
rrj01200
Carbon metabolism
rrj01230
Biosynthesis of amino acids
rrj01240
Biosynthesis of cofactors
rrj04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rrj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RrIowa_1353
09102 Energy metabolism
00680 Methane metabolism
RrIowa_1353
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RrIowa_1353
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RrIowa_1353
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RrIowa_1353
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RrIowa_1353
Enzymes [BR:
rrj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RrIowa_1353
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
WD40_Prp19
DUF1815
DUF5770
Motif
Other DBs
NCBI-ProteinID:
ABY73087
UniProt:
B0BV27
LinkDB
All DBs
Position
complement(1058062..1059324)
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AA seq
420 aa
AA seq
DB search
MNIFNNNLHETDKEINEIIKHEKLRQSSVIELIASENFVSPAVLEAQGALLTNKYAEGYP
SKRFYNGCEEVDKAENLAIERVKKLFNCKYANVQPHSGSQANQAVYLALLQPGDTVLGMS
LDSGGHLTHGAAPNMSGKWFNAVSYSVNKETYLIDYDEIERLADLHKPKLLIAGFSAYPR
NIDFAKFREIVDKVGAYFMADIAHIAGLVATGEHQSPIPYAHAVTSTTHKTLRGPRGGLI
LSNDEEIGHKINSALFPGLQGGPLMHIIAAKAVAFLENLQPEYKSYIQQVISNAKALASS
LQERGYDILTGGTDNHIVLVDLRKDGITGKLAANSLDRAGITCNKNAIPFDETSPFITSG
IRLGTPACTTRGFKEKDFVLVGHMVADILDGLKNNEDNSALEQQVLNEVTKLIELFPFYG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttttaataataatttacacgaaacggataaagagattaatgaaataataaaa
catgaaaagctacgtcaaagtagtgtaatcgagcttattgcatcagaaaatttcgtaagt
cctgctgtgcttgaagctcaaggggcgcttctgactaacaaatatgccgaaggataccca
agtaagcgattctataacggttgcgaggaagtagataaagctgaaaatttagctatagaa
cgagtaaaaaaactctttaactgcaaatatgcaaatgtccaacctcattcaggatcacaa
gcaaatcaggctgtatatcttgctttattacagccgggtgatacggttcttggtatgtcc
ttagatagcggcgggcatctaactcacggtgcagcgcctaatatgtctggtaaatggttt
aacgccgtttcttatagcgtaaataaagagacttatttaatcgattatgatgagattgaa
cgcttagcggatttgcataaaccaaaattacttatagccggtttttctgcttatcctcgt
aatattgattttgcaaaatttagagaaatcgtggataaagtaggagcttactttatggca
gatattgctcatattgcaggacttgttgccacaggtgagcatcaaagccctattccttat
gctcacgctgttacctctactactcataaaacacttagaggtccaagaggtggtttaatt
ttatctaacgatgaagagataggtcacaaaataaattctgcattatttccaggactacaa
ggtggtccgttaatgcatataatagctgcaaaagccgtagcttttttagaaaatttgcag
cctgaatataaaagttatattcagcaggtaataagtaacgctaaagctttagcaagtagc
ttgcaagaaagaggatatgatatattaacaggtggtaccgataatcatattgttttagtg
gatttgcgtaaagacggaatcactggtaagcttgccgcaaattctttggatagagcaggg
attacgtgtaataagaatgctatcccgtttgatgaaacttcgccttttatcacttcaggc
attcgccttggtactcccgcatgtactactagaggctttaaagaaaaggattttgtatta
gtcggtcatatggtagcagatattttagacggcttaaaaaataatgaagataatagcgct
cttgagcagcaagtattaaatgaagtgacaaaattaattgaattatttccgttttatggc
taa
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