Roseburia rectibacter: H8S51_000880
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Entry
H8S51_000880 CDS
T09206
Name
(GenBank) DNA polymerase III subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
rrk
Roseburia rectibacter
Pathway
rrk03030
DNA replication
rrk03430
Mismatch repair
rrk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rrk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H8S51_000880
03430 Mismatch repair
H8S51_000880
03440 Homologous recombination
H8S51_000880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rrk03032
]
H8S51_000880
03400 DNA repair and recombination proteins [BR:
rrk03400
]
H8S51_000880
Enzymes [BR:
rrk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H8S51_000880
DNA replication proteins [BR:
rrk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H8S51_000880
DNA repair and recombination proteins [BR:
rrk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H8S51_000880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNApol3-delta_C
Mg_chelatase
AAA_14
AAA_2
AAA_5
DUF6231
KH_PARP14_2
TniB
Motif
Other DBs
NCBI-ProteinID:
UMZ00329
LinkDB
All DBs
Position
185227..186276
Genome browser
AA seq
349 aa
AA seq
DB search
MPAFKDIVGHEQIIEHLQNAITMDKVSHAYILNGPDKSGKMMIAEAFAQTLQCEAVNKKL
EELAGETESERIESRFTAEPCMECHSCKQAAGKNQPDIIYVSHEKPNTISVDDIRTQLNN
DIVIKPYSSKHKIYIVDEAEKMNQQAQNALLKTIEEPPAYAVILLLTTNAESFLPTILSR
CVTLNLKAVPDEKIKKYLMAHYQIPDYQADVCVAFAQGNVGKAIQLAASDDFNELKASAL
QLIKRLHDIDLYEMTEAVKQISEYKLKINDYFDLMMIWYRDVLYYKATKDVNGLIFKDEV
YDIKRQAEQSSYNGIEEILQALSKAQVRLNANVNFDLVIELLLLTIKEN
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgccagcatttaaggacatcgttggacatgaacagatcatagagcacctgcagaatgcc
attaccatggataaagtttcacatgcttatatattaaacggtccggacaaatccggaaaa
atgatgatcgcggaggcatttgcacagacgctgcagtgtgaagcagtaaataaaaaatta
gaggaacttgcaggggaaacagaatctgaaagaatagagagcagatttacggcggagcca
tgtatggaatgtcattcctgtaaacaggcagcaggcaaaaatcagccggatattatttat
gtcagccatgaaaagccgaatacgatctcggtagacgatatccggacgcagctaaacaac
gacattgtgatcaaaccatacagcagtaaacataagatctacattgtggatgaagcggaa
aaaatgaaccagcaggcacagaatgcgctgttaaaaacgattgaagaaccgcctgcatat
gcggtgatcctgcttttgaccaccaatgcggagagctttcttccgacaatcttatcgcgt
tgtgtgacattaaatttaaaggcagtgccggatgaaaagatcaagaaatatctgatggca
cattatcagatcccggactatcaggcagatgtctgtgtggcatttgcacagggaaatgtc
ggaaaagcgatccagcttgcggcatcagatgattttaatgagttaaaagcatcggcgctc
cagctcatcaagcgtctgcacgatatcgatctctatgagatgacagaggcggtaaagcag
atcagtgaatacaaacttaagatcaacgattactttgatcttatgatgatctggtatcgt
gatgtattgtattataaagcaacgaaggatgtaaatggccttattttcaaggatgaggtt
tatgacataaaaagacaggcagagcagagttcctataatgggatcgaggaaatattacag
gcattatcaaaagcacaggtgcgtttgaatgcaaatgtaaattttgatctggtgatcgaa
ctgcttctgctgaccataaaggagaattaa
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