Roseburia rectibacter: H8S51_005945
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Entry
H8S51_005945 CDS
T09206
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rrk
Roseburia rectibacter
Pathway
rrk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rrk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H8S51_005945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrk03400
]
H8S51_005945
Enzymes [BR:
rrk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
H8S51_005945
DNA repair and recombination proteins [BR:
rrk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H8S51_005945
Prokaryotic type
H8S51_005945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UMZ01252
LinkDB
All DBs
Position
1237592..1238269
Genome browser
AA seq
225 aa
AA seq
DB search
MAMITNDWLPAIQGEFKKPYYRELFQFVKEEYSRAVIYPPADDIFNAMHFTPLSEVKVLI
LGQDPYHNENQAHGLSFSVLPSQKEIPPSLQNIYKELQDDLGCYIPNNGYLKKWADQGVL
LLNTVLTVRAHQANSHQGRGWEQFTDAIIQAVNAQDRPIVYMLWGRPAQSKIPMLTNPKH
LILKAPHPSPLSAYRGFFGCRHFSQANDFLKANGIAPIDWQIENI
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgatcacaaatgactggcttccggcaattcagggagagtttaaaaagccatat
tacagggaattatttcaatttgtaaaagaagaatacagcagggcggtcatttatccgccg
gcagatgatatcttcaatgcgatgcattttacaccgcttagtgaagtaaaagtattgatc
ttaggacaggatccgtatcacaatgagaatcaggcacatggtctgagtttttcagtactg
ccatcacagaaggagattccaccatcattgcagaatatttataaagaactgcaggatgat
ttaggctgttatataccgaacaacggatatttaaaaaaatgggcggatcagggagtgctt
cttttgaatacggtgctgacggttcgcgcgcatcaggctaattcccatcagggaagagga
tgggagcagtttaccgatgcgatcattcaggctgtcaatgcccaggatcgtccaatcgta
tatatgctgtggggcagacccgcacagagcaagatcccgatgctcacgaatccgaagcat
ctgatcttaaaggcaccgcatccgagtccgctttcagcatacagaggattctttggatgc
agacatttcagccaggcaaatgatttcttaaaagcaaatgggatcgcgccgatcgactgg
cagattgagaatatctga
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