Roseburia rectibacter: H8S51_006270
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Entry
H8S51_006270 CDS
T09206
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rrk
Roseburia rectibacter
Pathway
rrk03420
Nucleotide excision repair
rrk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rrk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H8S51_006270 (pcrA)
03430 Mismatch repair
H8S51_006270 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrk03400
]
H8S51_006270 (pcrA)
Enzymes [BR:
rrk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H8S51_006270 (pcrA)
DNA repair and recombination proteins [BR:
rrk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H8S51_006270 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
H8S51_006270 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
ResIII
Vp24_capsid
Motif
Other DBs
NCBI-ProteinID:
UMZ01311
LinkDB
All DBs
Position
1308625..1310868
Genome browser
AA seq
747 aa
AA seq
DB search
MSIYDTLNEQQREAVYQTEGPVLILAGAGSGKTRVLTHRTAYLIEEKGVNPYHIMAITFT
NKAAGEMRERIDKIVGFGSESIWVSTFHSSCVRILRRHIDRIGFDTNFTIYDADDSKSLM
KDICKRLEIDTKIYKEKSFLAAISSAKDELITPTELMQRALTSSDYAKRRQAEVYREYQD
ALHKNNALDFDDLIMKTVELLQSDPEVKNYYQERFHYIMVDEYQDTNTAQFELIRLLAGK
YQNLCVVGDDDQSIYKFRGANIYNILNFEKHFPDAKTIKLEQNYRSTQNILNAANSVIAN
NVGRKSKTLWTANEEGKKIDFEQFNTGYEEADFIACDIAGDVKNGAYHYGDHAVLYRTNA
QSRLFEERFIVSNIPYKIVGGVNFYARKEVKDLLAYLKTIDNARDDLAVRRILNVPKRGI
GATTVNRVTDYAGAYDISFYDALKRADEIPSIGKAASKVKPFVNLIQVFRSKLEFISISE
LLREVIEETGYVKELQAEGTDEAEARIENIDELLSKVVSYEESEEHPTLSGFLEEVALVA
DIDSLEDDSDYVVLMTLHSAKGLEFPKVYLAGMEDGLFPSYMSITSDDSSEQLEEERRLA
YVGITRAMKELTITCARQRMIRGETQYNKVSRFVKEIPAELLDGKETVPARKEAGTSTGN
EWSAKSKRMNMKQQPSGQSMQARAFASVHTKAEKLPYDIADRVLHTRFGEGTVVAIVEGG
RDYEVTVQFDTVGIKKMFASFAKLKKI
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgagtatatacgatacactgaatgaacagcagagggaagcagtatatcagacggaggga
ccggtgctgatcttagcgggagcaggttccgggaaaacgcgtgtgctgacacaccgtact
gcttatttaatagaagaaaagggagttaatccctatcatatcatggcgatcacttttacc
aacaaggcagctggggagatgcgggagcggattgataaaattgttggattcggttcggaa
agtatctgggtatcgacctttcattcaagttgtgtgagaatcctgcgccgtcatattgac
cggatcggatttgataccaattttacgatctacgatgcggatgattcaaaatccctgatg
aaagatatctgtaagcgtttagagatcgatactaagatttataaagagaaaagtttttta
gcagcaatctcgtcagcgaaagacgaactgatcacaccgacagaactgatgcagcgtgca
ctgacatcttctgattatgcaaaacgcagacaggcggaggtataccgggagtatcaggat
gcattacataagaacaatgcgcttgatttcgatgatctgatcatgaaaacggtagaactt
ttacagtcggatcctgaagtgaaaaattattatcaggagcgtttccattatattatggta
gacgagtatcaggataccaatacagcacagtttgaactgatccgtcttctggcgggaaag
tatcagaatctttgtgtagtaggtgatgatgaccagtctatttataagttccgtggggcg
aatatttataatattttaaattttgaaaaacattttccagatgcaaaaacaatcaaatta
gagcagaattaccgttccacccagaatattttaaatgcagcaaacagcgtgatcgcaaac
aatgtcggcagaaaatcaaagacactctggactgcaaatgaagaaggtaagaagattgat
tttgaacagtttaataccggttatgaggaagctgattttatcgcatgtgatattgcaggt
gatgtaaagaacggagcttatcattatggggatcatgctgttttataccgtacaaatgcg
cagtcacgactgtttgaggagcgttttatcgtatcaaatattccgtataagatcgtcggt
ggtgtaaacttttatgccagaaaagaagtgaaggatcttcttgcttatttaaagacgatt
gacaatgcacgtgatgatcttgcggtgcgtcgtattttaaatgttccaaaacgtggcatt
ggcgcaacgactgtaaaccgtgtgactgattatgctggggcatatgatatcagcttttat
gatgcattaaagcgtgcagatgaaatcccgtccattggaaaagcagcatcaaaagtaaag
ccattcgtaaatcttattcaggtgttccggagtaaactggagtttatcagcatttcagag
ctgcttcgtgaagtgatcgaggaaacaggatatgttaaggaacttcaggcggaaggtacc
gatgaagctgaggcaaggatcgagaatatcgatgagcttttaagtaaggttgtaagctat
gaggaaagcgaggaacatccgacactgagcggttttctggaagaagtagcactggtggca
gacattgacagcctggaagatgacagcgactatgttgtcttgatgacgctgcacagtgca
aagggactggaatttcctaaagtgtatttagcaggtatggaggatggtctgttcccaagc
tatatgtcgatcacgtcggatgattcaagtgagcagttagaggaagaacgccgccttgct
tatgtgggtattacccgtgcaatgaaagaattgacgatcacctgtgcaaggcagagaatg
atccgaggtgagacacagtacaataaagtttcacgatttgtcaaagaaattcctgcagaa
cttttagatggaaaagaaacagttcctgcaagaaaggaagcgggtacttcaactggaaat
gaatggagtgcaaaatcaaaacggatgaacatgaaacagcagccttccggacagagcatg
caggcgcgtgcatttgcgtctgttcatacgaaagcggaaaaactgccatatgatattgct
gaccgtgttttacatacaaggtttggagaaggcactgtagttgcgatcgtagaaggtgga
cgggactatgaagtcacggttcagtttgatacagtgggcatcaaaaaaatgtttgcttct
tttgcaaaattaaaaaagatataa
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