Roseburia rectibacter: H8S51_006685
Help
Entry
H8S51_006685 CDS
T09206
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rrk
Roseburia rectibacter
Brite
KEGG Orthology (KO) [BR:
rrk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrk03400
]
H8S51_006685
Enzymes [BR:
rrk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H8S51_006685
DNA repair and recombination proteins [BR:
rrk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
H8S51_006685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
ATPase_2
nSTAND1
CARME
Motif
Other DBs
NCBI-ProteinID:
UMZ01390
LinkDB
All DBs
Position
1410516..1414088
Genome browser
AA seq
1190 aa
AA seq
DB search
MSLQFIFGNSGSGKSDFLYDSVLKQAKENKEQQFLIIVPEQFTMQTQRELVERQKQHAIM
NVDVLSFARLAYRVFDDLGKQNVVVLEETGKNLVLRKVAEQKKAELNVLGANMNKMGYVG
EVKSLISELMQYNIRPDALAEFLEKEPLGEGLRLKMQDVLTMYQGFTEYLKGRYITAEEV
LELLYDVAEESKLLCGSVIVLDEFTGFTPIQNRLMEKLLVLAKKVSVSVTMDVREDFYQC
RGVHELFAMSKKTVASLLKVAELCKVPVEEPIVLPTGEKRRYAGAPDLYFMEQNLFRPGA
GSYRYKVSEKAMKSNKNHEKLTDSQLEETPDIRITSLKNPREELKFAACEIVRLTREQGY
RYRDIAVVTGDVQQYGNYVPEIFEQYHIPYFIDQTKNILFHPFIECIRAILEMIEYDFSY
ESVFRFLRCGLAEKIIPQGKLSTMELELDGETGEKSAQCKEQTIHRLTEQEIDRLENYVL
ARGIRGASRWSKPWTFVMPDGTLEDMERLNEIREAVYENFKPLLMAFRGKENTVSTQTFA
LYSLIRHLDMEQLLKERGEFFEKNGNQARAKEYDQIYKIVMDLLDKVTSLLGDETMTIRE
YSDILDAGFEAAKVGIIPPGNDTVTVGDIERTRLNHIKILFFVGVNDGVVPKAGNQGGII
SQFEREKMAEYHLELAPGAREKVFIQKFYLYLNMTKPSERLYVTFCRVNSDGKALRRSYL
IGTLLKLFPQLVVEEPSEEETLEGVLTAESALPFLMEGLNKPVEDEEAWTALLAWYLSDE
GDREKALQLFDAAFGVHQDDAISKAVTKALYGNTLDNSVTRLEQFAACAFAHYLSYGLRL
RERELQQFASVDMGNIYHDVLERFAKGIEMSEYTWFDIPQEAQDALLSQSMEDAIAGSGI
GDVFEDARNSYLLKRMETTAKRTIWALMLQVRKGKFVPSGFEVSFSRAERLDAVQFQLGE
DEKMRLRGRIDRIDTYETDDKVYVKIIDYKSGNTSFSLLNFYYGLQLQLVVYMNVALELT
KKIYKGKDTEPAGIFYYHITDPMVDSDGGESEEEIRRSILEQLKVGGLVNEDPEIYGAMD
TDFTGTSSVIPVALKADGSLKAASKTASAYEFGLMSDYVRKKIEHVGKEIFAGNVSVKPY
LLGDRSGCDYCPYHTICGFDVRMPGFSYQQFEKFDSSEEILAHIREEVED
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgtccctacaatttatatttggcaattctggcagcggaaagtcagattttctgtatgat
tccgtgctgaaacaggcaaaagagaataaagagcagcagtttttgatcatagtgccggag
cagtttacaatgcagacacagcgggaactggttgaaagacaaaaacagcacgcgatcatg
aacgtggatgtgctcagctttgcgagactggcataccgcgtatttgacgaccttggaaaa
caaaatgtggtcgtgctggaagagactggcaaaaatctcgtcctgcgcaaggtagcagaa
cagaaaaaagcagaacttaacgtgcttggtgcaaatatgaataagatgggatatgtcggt
gaggtaaaatccctgatctcagaactgatgcagtataatatacgcccggatgcgttagca
gaatttctggaaaaagagccgcttggagagggactgcgcttaaaaatgcaggatgtcctt
accatgtatcagggatttacggagtatttgaaaggcagatatatcacagcagaggaagtg
ttagagcttctctatgatgtggcagaagagtctaagctgctttgcggcagtgtgatcgta
ttagacgagtttacgggttttacgccgatccagaaccgtctgatggaaaaactgctcgta
ctggcaaagaaggtcagtgtctctgtcacaatggatgtcagggaagatttttatcagtgc
agaggtgtgcatgaactttttgccatgagtaaaaaaacggtggcatccctgcttaaagtg
gcagaattatgtaaagttccggtcgaggagccgatcgtgcttccaactggagaaaagaga
cgttatgccggtgcaccggatctttatttcatggagcagaatctattccgtccgggagca
ggaagttacagatataaagtgtcggaaaaagcaatgaaaagcaataaaaaccatgaaaaa
ttaacagacagccagttggaagagacaccggatatccgtatcacatccctgaagaatcca
agggaagaattaaaatttgccgcctgcgagatcgtgcgcctgacaagggagcaggggtac
cgttaccgtgatattgcggtggtcacaggagatgtgcagcaatatggcaattatgtgccg
gaaatctttgaacagtaccatattccatactttatcgatcagacaaaaaatatcctgttt
catccgtttattgagtgcatccgtgcaattttagagatgatcgaatatgatttttcgtat
gaaagcgttttccggtttttaagatgcggtcttgctgaaaaaataataccacaggggaaa
ctgtcaaccatggaactggaattggatggagaaaccggtgaaaagtctgcacaatgtaaa
gagcagacaattcacagacttacggaacaggagatcgaccgtctggaaaactatgtgctt
gcgcgcggaatccgtggggcatcccgctggagcaagccatggacatttgtgatgccggat
ggaacattagaagatatggagcggttaaatgagatccgcgaggcggtttatgagaacttt
aaaccgcttcttatggcttttcggggaaaggaaaacaccgtcagtacacagacatttgca
ttatacagcctgatccggcatcttgacatggagcagcttctaaaagaacgcggagagttt
tttgagaaaaatgggaatcaggcgagggcaaaagaatacgaccagatctataaaattgtg
atggatctgcttgataaagtgacatccctgctgggcgatgagacgatgacgatccgggaa
tacagtgatatcttagatgccggatttgaggcggcaaaggttggtattatcccgccggga
aatgatactgtaacggtcggagacattgagcggacaagattaaatcatataaagatttta
ttttttgtcggtgtcaatgacggagttgttccgaaagcaggaaatcagggtggtattatc
tcacagtttgagcgtgagaagatggcagaatatcatctggaactggcaccgggggcaagg
gaaaaagtatttatccagaagttttacctgtacttaaacatgacaaaaccgtccgaacgg
ctttatgtgacattctgccgtgttaattcggatggaaaagcactgcgccgttcttatctg
atcggaacactcttaaaattattccctcagcttgtggtggaagaaccatccgaggaggag
acgttagagggcgttctgactgcagagagtgccctgccgtttctgatggaaggattaaac
aagccggtggaagatgaagaagcatggacggcacttctggcatggtatttatcggatgag
ggagacagagagaaggcattgcagctttttgatgcagcgtttggtgtgcatcaggatgat
gcgatcagcaaggctgtcacgaaggctctgtatggaaatacgttagataacagcgtgaca
agacttgagcagtttgcagcctgtgcatttgcacattatctaagctatggtcttagatta
agagaacgtgaactgcagcagtttgcaagcgtggacatgggaaatatttatcatgatgtg
ttagagcgttttgcaaaagggatcgagatgtccgaatatacgtggtttgatattccacaa
gaagcacaggatgccctgctttcccagagtatggaagatgcgatcgcaggaagcgggatc
ggggatgtgtttgaggatgcaagaaacagctatctgttaaaacggatggagacaacggca
aaacggacgatatgggcattgatgttacaggtacggaaagggaaatttgtgccgagcggg
tttgaagtatcattttcacgcgccgaacggttagatgcggtgcagtttcaattaggtgag
gatgagaaaatgcgtctgcgcggcaggatcgaccgtattgatacttatgagacggatgac
aaagtttatgtaaagatcattgattataaatccggcaatacaagtttttcactgttgaat
ttttattatggactgcagctacagctcgtcgtctatatgaacgtggcattagagctcact
aagaaaatatataaggggaaagacacagaaccggctggaattttttactatcacattaca
gacccaatggtggattcagatggaggggagtctgaagaggagatcaggcggagtatctta
gaacagttgaaagtaggcggtctggtcaatgaagacccggaaatttacggcgcgatggat
acggattttacaggcacatcgtcagtgatcccggtggcattaaaggcagatggttcctta
aaggcagcttctaagacggcgagcgcctatgaatttggactgatgtctgactatgtgcgc
aagaagatcgagcatgtaggaaaagaaatctttgcaggaaatgtgtcagtaaagccatat
ctgttaggtgacagaagcggatgtgattattgtccataccacacgatctgtggatttgat
gtgcggatgccgggattttcctatcagcagtttgaaaagtttgacagcagtgaggagatc
cttgcacatatccgggaagaggtagaagattaa
DBGET
integrated database retrieval system
