Roseburia rectibacter: H8S51_009085
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Entry
H8S51_009085 CDS
T09206
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rrk
Roseburia rectibacter
Pathway
rrk03420
Nucleotide excision repair
rrk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rrk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H8S51_009085
03430 Mismatch repair
H8S51_009085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrk03400
]
H8S51_009085
Enzymes [BR:
rrk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H8S51_009085
DNA repair and recombination proteins [BR:
rrk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H8S51_009085
MMR (mismatch excision repair)
Other MMR factors
H8S51_009085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
DEAD
ResIII
AAA_14
ChitinaseA_N
Motif
Other DBs
NCBI-ProteinID:
UMZ01834
LinkDB
All DBs
Position
1911540..1913363
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AA seq
607 aa
AA seq
DB search
MSFNASQTRAIHHKNGPMLVLAGPGSGKTLVITERTKYLIEECGIDPAQILVITFTKAAA
TEMKRRFQRKMNRSCPVTFGTFHAVYFAILKHAYNYSADNIAREEQRYQCMREIIAKEHL
TYEDETEFITSLLGEISLVKNSGIQIANYYSKNCAETVFRKVYREYHEFLYKNRLIDFDD
MLVYTKELFEQRPDILAAWQNKYRYILIDEFQDINRIQYDIIKMLAGERKNLFIVGDDDQ
SIYRFRGAKPEIMLHFKDDYPEAETVLLDVNYRSVKNIVTSAGYLIGHNKERFQKKIEAA
DQGDIPVEWQLFESQRKENARIIWDIQEAVEKGAKYEEFAVLFRTNTQPRLLMEQLMEYN
IPFRTRDTVPNLYEHWIAKDIFAYIRIAMGSRGRRDFLQIMNRPKRYISRESLDEETVAF
DVWEWYYEEQPWVAKRIEKLEGDIRMLERLSPYAAINYIRKAIGYDEFCTEYADYRRIKA
DDLFDVLDELLDAAREYKTYDAWFDHIENYTKELKEFYRVQNQNPNSVALATLHSAKGLE
YENVYIIDVNEGVMPYKKAVLEQEIEEERRMFYVGMTRAKKNLHLFSVKQLNHKDAEISR
FIKEAQN
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgagctttaatgcatcacagacacgggcaatccatcataaaaatggacccatgctcgtt
ctcgccggaccaggttccggaaaaacccttgtaattacggaacgcacgaaatatctgatc
gaagagtgtgggatagatccagcgcagattcttgttatcacatttacaaaagctgcggca
acagagatgaaacgcaggtttcagcggaagatgaacagatcatgtccggtaacatttggt
acattccatgcggtttattttgcaatcttaaagcatgcatataattacagtgcggataat
attgcgagagaggaacaacgctatcagtgtatgagagagatcatagcgaaggaacatctg
acctatgaggatgagacggaatttatcacttccttgctgggggagatcagtctggtcaaa
aattcaggaatacagatcgcaaattattattcgaaaaactgtgcggaaactgtgttccgg
aaggtgtaccgtgaatatcatgagtttttgtataaaaacagactgatcgattttgatgat
atgctggtatacacgaaagaactttttgagcagcgccccgatatccttgcggcgtggcag
aataaataccgttatattctgattgatgagttccaggatatcaaccggattcagtatgat
attataaaaatgctggcaggagagcgtaaaaatctgtttatcgtgggagacgatgaccag
tcaatctatcgtttccggggcgcgaagccggagatcatgttacactttaaagatgattac
ccggaggcggagacggttcttttagatgtgaattaccgttccgtaaaaaacattgtgaca
agtgccggatatctcatcggccacaataaggaacgctttcagaaaaaaatagaggcggcg
gatcagggggatatcccggttgaatggcagttgtttgaaagccagcgcaaagaaaatgca
agaatcatctgggatattcaggaggcggtggagaaaggcgcaaaatatgaagaatttgca
gtgcttttccgcaccaatacacagccgcgacttctgatggaacagctgatggagtataat
attccattccgaacgagagataccgtgccgaacttatacgagcactggatcgcaaaagat
atctttgcatacataaggattgcgatgggaagcaggggacgcagggatttcctgcagatc
atgaaccgtccgaaacgctatatcagccgggaatcgctagacgaggagaccgtggcattt
gatgtgtgggagtggtactatgaggaacagccgtgggtggcaaagcgcatcgaaaaatta
gagggcgatatccgtatgttagagagattaagtccgtatgcggcgatcaattacatccgg
aaggcaatcggatatgatgagttttgtacagaatatgcggattacagacgtatcaaagcg
gatgatctgtttgatgttttggatgagctcctggatgcagcgagggaatataagacttat
gatgcgtggtttgaccacattgaaaattatacgaaagagttaaaagaattttatcgtgtg
cagaaccagaatccaaacagtgtagcgttagcaacattgcatagtgcaaaagggttagaa
tatgagaatgtatacatcattgacgtcaatgaaggagttatgccatacaaaaaagcagtg
ttagaacaggaaatagaagaagagcgaaggatgttttatgtagggatgacgcgtgcaaaa
aaaaatctgcatcttttttcggtaaaacaactgaaccataaagatgcagaaatttcgcgc
ttcatcaaagaagctcagaactaa
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