Roseburia rectibacter: H8S51_009560
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Entry
H8S51_009560 CDS
T09206
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rrk
Roseburia rectibacter
Pathway
rrk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rrk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H8S51_009560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rrk03019
]
H8S51_009560
03016 Transfer RNA biogenesis [BR:
rrk03016
]
H8S51_009560
Enzymes [BR:
rrk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
H8S51_009560
Messenger RNA biogenesis [BR:
rrk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H8S51_009560
Transfer RNA biogenesis [BR:
rrk03016
]
Prokaryotic type
tRNA degradation factors
H8S51_009560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH_KhpA-B
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
UMY98565
LinkDB
All DBs
Position
2006968..2009061
Genome browser
AA seq
697 aa
AA seq
DB search
MYKSFSMELAGRTLTVDIGRVCAQANGAALLKYGETTVLSTATASDKPRDGVDFFPLSVE
YEEKMYAVGKIPGGFNKREGKASENAILTSRVIDRPMRPLFPKDYRNDVTINNMVMSVDT
ECRPEVVAMIGSALAVTISDIPFAGPCAMTQMGMVDGEFIINPSQKVWDTGDLQLTVAST
SEKVIMIEAGANEIPEKKMIEAIYKCHDVNQTIIAFINHIVEEVGKPKHEYTSCAIPEEM
FAAMKEIVTPEQMEEAVFTDEKQKREENIREITDKLAEAFADNEEWLAVLGEAVYQYQKK
TVRKMILKDHKRPDGRAINQIRPLAAEVDLIPRVHGSAMFTRGQTQICDVVTLAPLSEVQ
KIDGLDENITTKRYIHQYNFPAYSVGETKVSRGPGRREIGHGALAEKALMAVLPSEEEFP
YAIRAVSETFESNGSTSMASTCASCMSLMAAGVPLKAMVAGISCGLVTGDTDDDYLVLTD
IQGLEDFFGDMDFKVTGTHKGITAIQMDIKIHGLTRPIVEEAISRAREARIYIMDEVMSK
AIEEPRKEVSAYAPKIVQIQINPDKIGDVVGQRGKTINEIIDRTGVKIDITDDGAVSVCG
TDAEMMNKAIEMIKIITTDFAEGQIFTGTVVSIKEFGAFIEFAPGKEGMVHISKISKERI
NRVEDVLTLGDKVKVVCLGKDKMGRISFSMKDVPAEA
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaagtttttcaatggaacttgccggcagaacattgactgttgatatcggcaga
gtgtgtgcccaggcaaatggtgctgcattattaaaatacggcgagacaactgtcttatct
acagctaccgcatcggacaagccgagagatggcgttgatttcttcccgctcagtgttgag
tatgaggagaagatgtatgcagttggaaagatccctggaggcttcaataagagagaggga
aaagcatctgagaatgcgatcctgacttctcgtgttattgaccgtccaatgcgtccgctg
ttcccgaaagattaccgtaatgacgttaccatcaacaacatggttatgtctgttgacaca
gagtgccgtccggaagttgtagcaatgatcggttctgcacttgcagttaccatttctgac
atcccatttgcaggtccttgtgctatgacacagatgggtatggtagatggcgagtttatc
atcaatccgtcccagaaagtatgggataccggtgatttacagcttacggttgcatctaca
tcagagaaagtcatcatgatcgaggccggtgcgaatgagatcccggaaaagaaaatgatc
gaggcaatctataaatgtcatgatgtaaaccagacgatcattgcgtttatcaatcatatc
gtagaagaagtaggcaagccaaaacatgagtacacaagctgtgcaattccggaagaaatg
tttgctgcaatgaaagaaatcgtaacaccggagcagatggaagaagctgtatttaccgat
gaaaagcagaaacgtgaagagaatatccgtgagattacagataaacttgctgaggcattt
gcagataacgaagaatggttagcagtgctcggtgaggctgtttaccagtatcagaagaag
actgtccgtaagatgatcttaaaagatcataaacgtccggatggccgtgcaatcaatcag
atccgtccacttgcagcagaggttgacctgattccaagagttcatggttctgcaatgttt
acccgtggacagacacagatctgtgatgttgttacattagctccactttctgaagtacag
aagattgacggattagatgagaatattacaacaaagagatatatccatcagtataacttc
cctgcatattctgtaggtgagacaaaggtttcacgtggaccgggacgtcgtgagatcggt
catggtgcattagcagagaaagcacttatggctgtacttccttctgaggaagagttcccg
tatgcaattcgtgctgtatccgagacatttgagtcaaacggatctacttccatggcttct
acctgtgcatcctgtatgtcattaatggcagcaggcgttccgcttaaagcaatggttgca
ggtatttcctgtggtcttgttaccggtgatacagatgatgattatcttgttcttactgat
atccagggacttgaagatttcttcggggatatggactttaaagtaaccggtacgcacaaa
ggtatcactgcgatccagatggatatcaagattcatggtcttacaagaccgatcgttgag
gaagcgatcagccgtgcaagagaggcaagaatctacatcatggatgaggttatgtcaaaa
gcgatcgaagagccgagaaaagaagtaagtgcgtatgcaccgaagatcgttcagattcag
atcaatccggacaagattggtgatgtagtcggacagagaggcaagacaatcaacgagatc
atcgaccgcactggtgttaagatcgatatcacggatgacggtgcagtttctgtatgcggt
acagatgctgagatgatgaataaagcaatcgagatgatcaagatcatcacgactgacttt
gctgagggacagatttttaccggtacggttgtaagcatcaaagagtttggtgcattcatt
gagtttgctccgggtaaagagggaatggttcatatttccaaaatttccaaagagcgtatc
aaccgtgtagaagatgtcctgacattaggagataaggttaaagttgtatgccttggaaaa
gataagatgggacgcatcagcttttctatgaaggatgttccggcagaggcataa
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