Roseburia rectibacter: H8S51_012140
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Entry
H8S51_012140 CDS
T09206
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rrk
Roseburia rectibacter
Pathway
rrk00300
Lysine biosynthesis
rrk00470
D-Amino acid metabolism
rrk01100
Metabolic pathways
rrk01110
Biosynthesis of secondary metabolites
rrk01120
Microbial metabolism in diverse environments
rrk01230
Biosynthesis of amino acids
Module
rrk_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rrk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
H8S51_012140 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
H8S51_012140 (dapF)
Enzymes [BR:
rrk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
H8S51_012140 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
DUF4396
Motif
Other DBs
NCBI-ProteinID:
UMY99055
LinkDB
All DBs
Position
complement(2572615..2573469)
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AA seq
284 aa
AA seq
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MKFTKMQAFGNDYVYIDAVHQDIKNLPELARFVSDRHFAIGSDGMVLICPSDKGDFRMRM
FNPDGSEGEMCGNALRSVGKYVYDHRLTDKTELVIETLGGMQHLNLTVTDGLVSNIRADI
GEPRLDTKVIPVNTDLEQFVEQPVEVLDKTFHITAVSWGNPHCAMFVDSVADLDVERYGK
TIEHMTSLFPNKTNVTFAEFVKRDYIKIREWERGTGETIGCGTGCSTAVVTGVLTGRTDR
KVTVEQIGGPLLIEWDEKTNHLFMTGPSHTVFEAEIDASHILEK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacaaaaatgcaggcatttggaaatgattatgtatatattgatgccgttcac
caggatattaaaaatttaccggagctggcacggtttgtcagcgacagacattttgccatt
ggatcagacggaatggttttgatctgtccatctgataagggagatttccggatgcggatg
ttcaatccggatggttcagaaggagaaatgtgcggcaacgcactccgttctgtcggaaaa
tatgtttatgaccacaggctgaccgataagacagaacttgtgatcgagacacttggtgga
atgcagcatctgaatctgacggtaacggatggtctggtatcaaacatccgagcagatatc
ggggaaccgagactggatacgaaagtaattccggtaaatacagatttagagcagtttgta
gagcagccggtggaggtgctggataaaacatttcatatcacggcagtatcctggggcaat
ccacattgtgcaatgtttgtggattctgtcgcagaccttgatgtggagcgttacggaaag
acaatcgagcatatgacatcgttgtttccaaataaaaccaatgttacatttgcagagttt
gtaaagcgtgattatatcaagatccgtgaatgggaacgtgggaccggtgagacgatcgga
tgtgggacaggctgttcgacagcggttgttacaggtgttctgaccggacgtacagaccgc
aaagttactgtggagcagattggtggacctcttctgatcgagtgggatgagaaaacgaac
catttatttatgacgggaccgtcacacactgtgtttgaagcggagattgatgcatcacac
attttagaaaaataa
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