Roseburia rectibacter: H8S51_012295
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Entry
H8S51_012295 CDS
T09206
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rrk
Roseburia rectibacter
Pathway
rrk03030
DNA replication
rrk03430
Mismatch repair
rrk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rrk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H8S51_012295 (holA)
03430 Mismatch repair
H8S51_012295 (holA)
03440 Homologous recombination
H8S51_012295 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rrk03032
]
H8S51_012295 (holA)
03400 DNA repair and recombination proteins [BR:
rrk03400
]
H8S51_012295 (holA)
Enzymes [BR:
rrk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H8S51_012295 (holA)
DNA replication proteins [BR:
rrk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H8S51_012295 (holA)
DNA repair and recombination proteins [BR:
rrk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H8S51_012295 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
KH_DEAH11_2nd
HP_1247_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
UMY99086
LinkDB
All DBs
Position
complement(2615093..2616079)
Genome browser
AA seq
328 aa
AA seq
DB search
MKTIDEDIKSGNFKQIYLLYGTEAYLKKQYKDKLKNAMAAPDDTMNFTRFEGKNINPKEV
IDLAETLPFFADKRVILIEDSGFFKSSCEDLAEYLSQVAPATHFIFVEEEADKRSKMYKA
VKNNGKIVEFSAQSEELLTRWILTRLKKEGKNITGSVMQLFLSRTGTDMGNIDRELEKLI
CYALDRDVITTEDVMAVTTEQTTNKIFEMVNAIAEHNKRRALDLYYDLLTLKEPPMRIMF
LITRQFQILLNVRDMAGRGMDNQTIAKNAGIPPFAVKKNISQAKGFTMAQLKMALYDGVD
LEESVKTGRMNDQMAVELFIMKYSSTKR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgattgatgaggatattaagagcggaaatttcaaacagatctatctgttgtat
ggaacggaagcatatttaaagaaacaatacaaagataaactgaaaaatgcaatggcagcg
ccggatgataccatgaattttacgaggtttgaagggaaaaatatcaatccgaaagaagtg
atcgatcttgccgagacactgcctttttttgcggataaaagagtcatactgatcgaggac
agtggcttttttaaaagttcctgtgaggatcttgccgaatatctgtcacaggtggcgcca
gcgacacattttatctttgtggaggaggaagcagataagcgttcgaaaatgtataaagcg
gttaaaaataatggaaaaatcgtagaattttcggcacagagtgaggaacttttgacacgc
tggattctgacgagactaaagaaagaggggaaaaatatcaccggttctgtgatgcagcta
tttttaagcaggacaggaacggacatgggaaatatcgacagggaattagagaagctgatc
tgttatgctctggatcgagatgtgatcacaacggaagatgtgatggcagttacgacagaa
cagaccaccaataagatatttgagatggtcaatgcgatagcggagcataacaaacgcaga
gcactggatctttactatgatcttctgacgttgaaagaaccgccgatgcgtatcatgttt
ctgatcaccagacagtttcagatccttttgaatgtgcgtgatatggcaggacgagggatg
gacaaccagacaatcgcgaaaaatgcaggaatacctccgtttgcagtaaaaaagaatatt
tcacaggcaaaaggatttacgatggcacagttgaagatggcgctttatgatggagtggat
ttagaagagtctgtaaaaacagggcggatgaatgaccagatggcagtggaactttttatc
atgaagtacagcagtacgaagagataa
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