Roseburia rectibacter: H8S51_012385
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Entry
H8S51_012385 CDS
T09206
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rrk
Roseburia rectibacter
Pathway
rrk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rrk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
H8S51_012385
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rrk02000
]
H8S51_012385
Transporters [BR:
rrk02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
H8S51_012385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UMY99103
LinkDB
All DBs
Position
complement(2635951..2637612)
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AA seq
553 aa
AA seq
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MRKERRWKKVLSALMLTAAMGITAVGCGTSGGNTGSQPQGENAAATEMAEVSDDIVNIGV
TDTLGTLNPLLMDGGEINKYATSLMFLPLVELNSKLEFEGEIADSVTTEDNKNFIVHIDE
KATWSDGEKITADDVVYTALRLTSPVIGNTSMMYYVFEGVGDDGFTEEGAESIDGIKAID
DATVQFTTKDEMSLATFENSYARYLMTLPKHVIEQYSEEELKTADWFNHPDVVSGPYMVT
DFDVDHYISYKANENYWKGAPKIAKLNIKIVSGSQLYAGLQSGEIDITQPTMSVIPQEDY
DSIEGLSNVNVVYGEPVTNQSVFIQTKNVPDVRVRQAMLYAIDRKMVLEQLLKGKGEVVD
GFLSSASPFYDDGIVPVEQDVEKAKELLAEAGWDGSQTLRFCVNSGDGAFVNAANVFVAQ
WAAVGIKVEVQTVDFATLMSVAGTNDYDILAVQYTYAPVDPYPDVAWLLGGEESWTGYGD
DSVNEALAKTQTTSDIDEIKGLYSVVDQKVQEDVPMFSAYIVSAQAAVNKRLVNATPSVY
GFFNNVEQWEITK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagaaagaagatggaaaaaagtcctgtcggcgcttatgcttacggctgcgatg
gggattactgctgttggatgcgggacttctggcggcaatacaggcagtcagccgcagggg
gaaaatgctgcagcaacagagatggcagaagtttcagatgatattgtaaacattggtgtt
acggatacacttggaacattaaatccgcttttgatggatggcggtgagatcaataaatat
gcgaccagcctgatgtttcttccactggtggaattaaattccaaactggaatttgaaggt
gagattgctgattctgtcacaacggaagataataaaaatttcatcgtgcatatcgatgag
aaagcaacctggtcagatggcgagaagatcactgcagatgatgtggtatatacagcactt
cgtctgacttccccggttattggaaatacctccatgatgtattatgtgtttgaaggtgtc
ggagatgacggttttacggaagagggagcggagagtatcgacggtatcaaagcgattgat
gatgcaacagtacagtttactacaaaagatgagatgtcattagccacatttgaaaattcc
tatgcacgttatctgatgacacttccaaaacatgtgatcgagcagtacagtgaggaagaa
ttaaagacggctgactggtttaatcatccggatgtggtcagcggaccatatatggtgacg
gattttgatgtcgatcattatatttcttataaagcgaatgaaaattactggaaaggtgca
ccaaagatcgcgaaactcaatatcaagatcgtaagcggcagtcagctttatgccggatta
cagtccggggagatcgacattacacagccgacaatgagtgttatcccacaggaagattat
gacagcattgaaggactttccaatgtgaatgttgtatacggagaaccggtaacaaaccag
tccgtgtttatccagacaaagaatgttcctgatgtgcgtgtgcgtcaggcaatgttatat
gcaattgaccgtaagatggttttagagcagcttttaaaaggaaaaggtgaagttgtagac
ggatttctttcttctgcaagtcctttttatgacgatggcatcgttccggtagaacaggat
gtggagaaagcgaaagaacttttagcagaggccggatgggacggatcacagactttacgt
ttttgtgtgaattccggagacggcgcattcgtaaatgcagcaaatgtgtttgtggcacag
tgggctgcagttggtattaaggtggaagtgcagacagtggattttgcaaccctgatgtct
gtagcaggtacaaatgattatgatattttggcggtacagtatacttatgcgccggttgat
ccatacccggatgtagcatggcttttaggtggcgaggagagctggaccggatacggagat
gacagtgtaaatgaagcacttgcaaagacacagacgacaagtgatattgatgagatcaaa
ggtctttattcagtagtggatcagaaagtgcaggaagatgtgccgatgttctctgcttat
attgtcagtgcgcaggcggctgttaacaaacgtctggtaaatgccacaccaagtgtgtat
ggtttctttaataatgtagaacagtgggaaattacgaaataa
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