Roseburia rectibacter: H8S51_012515
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Entry
H8S51_012515 CDS
T09206
Name
(GenBank) HAD-IA family hydrolase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rrk
Roseburia rectibacter
Pathway
rrk03420
Nucleotide excision repair
rrk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rrk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H8S51_012515
03430 Mismatch repair
H8S51_012515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrk03400
]
H8S51_012515
Enzymes [BR:
rrk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H8S51_012515
DNA repair and recombination proteins [BR:
rrk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H8S51_012515
MMR (mismatch excision repair)
Other MMR factors
H8S51_012515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAD_2
Hydrolase
UvrD_C
UvrD_C_2
AAA_19
HAD
Viral_helicase1
UvrD-helicase
Hydrolase_like
DEAD
SLFN-g3_helicase
ResIII
FlaC_arch
NACHT
CYP38_PsbQ-like
Motif
Other DBs
NCBI-ProteinID:
UMY99127
LinkDB
All DBs
Position
complement(2663931..2667731)
Genome browser
AA seq
1266 aa
AA seq
DB search
MNTKNIKAVIFDMDGTLIDTEKYYRMFWPKALAHFGYEMTDEQALTMRSLGQPYAPQHLK
EMFHDPDLDYTAIRNYRKQIMGECLKKNGIEIKKGAIELLDYLKAQGIRRAIATATDQVR
TEQYLKQLGLYGYFDQIICATMVEHGKPSPDIYQYACRQLALLPNECMAVEDSPNGVCSA
YDAGCNVVMVPDQTEPDETLRGKLAARVDSLDEIIKLFEKFPGLTKEDEEHQLSKIIEIA
QDNLDHAKEDIRKINEDLADLLEVYDAKDKEGLALWNNATARLKEEERELVRYEKARKKP
YFGRIDFRDPKAKADETFYIGRVGITDSSSDPVVLDWRAPIASVYYESRMGTCQYTVSSE
GTFEIDLKRKRTYEIENDRLKDFFDSDVVANDELLTKYLAKNKKAVLGEIIATIQKEQNL
IIRRSPKTNIIVQGVAGSGKTTVAMHRISYILYNYKDDFRPEDFYIIGSNRILLNYITSV
LPELDVYGIRQMTMEQLFIRLLYEDWGETRFSYHNIDKTDAKNSIRGGTAWFLDLEKFCQ
NYENQSIAKEDIYMEKTGNLLLSKEQIGRYLKNNPKVSMQSKILMLNEILYAKYENEVSG
KSVTFPPKEKKILDKKYASYFGDGKWRESVFTFYREFLLAQQEAGKEVDVPENSFDVYDL
AALAYIYKRIKETDPVREASHVVIDEAQDFGMMSYRCLHYCLYDCTYTIMGDTSQNIHFE
YGLNDWEELKKLILTGTFDAFGLLRKSYRNTVEISGFANEILRHGDFSIYPVEPIIRHGN
PVQTVACPDENQLLADTVTTIKKWQQDGYETIAVICRDEAEAAQAAEELKKYVKIAESDL
EKAEFGDGVMVLPVSYTKGLEFDAVLLFDPTQEKYPSDNGHVKLLYVAATRALHELVVLH
RGKLTGILADKVPEGKHMKEFAAETLTKAAEFERVQHTEKEIEQQRRIEGAKDMAEREYI
GPKRIVIKTQGKENEAAARGKILTGQKMASACKRAVAAPVRKAADNSGKNEKNHTEEIII
SPYEFGAIPDNAILRVKGHSRNNFVIKWIKKTKSYVELSSMYGLLRITPITPEVIRVSFV
KGVTEKIGDTAWKGKADTAFTWSAKESKMLVEIATEKVTVHIAKNNGAVCFYNEKKQLLL
TEKAEEPRFQEGGCNWTFFEWEKSEHLKAKGLLAADFMDVTAKAKYISYGGKKLRMPLIL
SEKGYGLAIASKGTVLFCGIRTFGPYIMAEGSQSDYYFISEKNREKLVEIYQRTLTLRYC
SQAGIF
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaaaaacataaaagccgtaatttttgatatggacggcacactgatcgatacg
gaaaaatattaccgcatgttctggccaaaggcactggcgcattttgggtatgaaatgacg
gatgaacaggcacttaccatgcggtcgcttgggcagccatatgcaccacagcatttaaaa
gaaatgtttcatgatccggatctggattatacggcgatacgaaattatcgcaagcagatc
atgggagagtgtctgaaaaaaaatggaattgagatcaaaaaaggtgcaatcgaacttctt
gattatttaaaggcacagggtattcgccgtgcaatcgcgacggcgacagatcaggtgcgt
acggaacagtatttaaagcagcttggtctttacggttattttgatcagatcatctgtgca
acgatggtggaacatggaaagccttcaccggatatctatcagtatgcatgcagacagctt
gcacttttgccgaatgaatgtatggcggttgaggattccccaaacggtgtatgcagtgct
tatgatgcaggctgtaatgttgtgatggtgccggatcagaccgaaccggatgagacactg
cgtgggaaactggcagcgagggtggattcgttagatgagatcataaagctgtttgagaaa
ttccccggtctgacaaaggaagacgaggagcatcagctcagtaaaatcatagagatcgcg
caggataatttagatcatgcgaaagaagatatccggaagatcaatgaagatcttgccgat
ctcctcgaagtctacgatgcaaaggataaggaaggactggcactctggaacaatgcgact
gcgaggttaaaagaggaagaacgggaactggtgcgctatgaaaaggcacgtaagaagcca
tattttgggcgcattgatttcagggatccaaaggcgaaagcggatgagactttttatatt
ggaagagtcggcatcacggacagcagctctgatccggttgtgctcgactggagagcaccg
atcgcatcagtatactatgagagcaggatgggaacgtgccaatataccgtgagttctgag
ggaacatttgagattgatctgaaacgcaagcgcacttacgagattgaaaatgaccggtta
aaagatttctttgattcggatgtggtcgccaacgatgaactgctgacaaaataccttgcc
aaaaataaaaaggcagttttgggcgagatcattgcgacgatccagaaagagcagaacctc
attatccgccgttcaccgaaaacaaacatcattgtgcagggtgtcgctggttccggaaaa
acgacggtggcgatgcaccgcatttcctatattctatataattataaagatgatttccgc
ccggaggacttttatattataggaagcaaccggattcttttgaattatatcacaagtgtt
ctgccggaacttgatgtgtatggaatccgtcagatgacgatggagcagcttttcatccgc
cttttgtatgaggattggggcgagacgcggttttcttaccacaatatcgacaagacagat
gcaaaaaacagcatcaggggcggcacggcgtggtttctggatttagaaaaattctgccag
aactatgagaatcagtcgatcgcaaaagaagacatttatatggaaaagactggaaatctc
ctgttatcaaaggagcagatcggacgttatttaaaaaataatccgaaagtttccatgcag
agcaagatactcatgttaaatgagattttgtatgcaaaatatgaaaatgaggtttccggg
aagtccgtgacttttccgccaaaagagaaaaagattttagacaaaaagtacgcgtcttat
tttggggatggaaaatggagagaatctgtatttactttttacagagaatttttacttgcg
cagcaggaggcaggaaaagaagtcgatgtgccggaaaactcgtttgatgtctatgatctt
gcggcacttgcatatatttacaagaggatcaaagagacggatccggtgcgtgaggcgagc
catgtagtgattgatgaggcgcaggactttggcatgatgtcatacagatgcctgcattac
tgtctgtatgactgtacttacacgatcatgggtgatacatcccagaatattcattttgag
tatggtttaaacgactgggaagagttgaaaaaactgattttgacagggacatttgatgcg
ttcggacttcttaggaaaagttaccgcaacacggtggaaatttctgggtttgcaaatgaa
attctgcgtcatggagatttttccatttatccggtagagccgattatccgtcacggaaat
ccggtgcagacggtggcatgtccggatgaaaatcaattgctggcagataccgtcaccacg
atcaaaaaatggcagcaggacggttatgagacgatcgctgtgatctgtcgtgatgaggcg
gaagcggcacaggctgcggaagaactaaagaaatatgtaaaaattgcagaatcagatctg
gaaaaagccgagttcggggatggcgtcatggtgcttcctgtctcctacacgaaaggactt
gaatttgatgctgtgctgctgtttgatccgacacaggaaaaatacccgtcggataacggg
catgtcaaacttctgtatgtggctgcgacccgcgcactgcatgaacttgtggttttgcac
cgtggaaagctgaccgggatccttgccgacaaagtcccggaaggaaaacatatgaaagag
tttgcggcagaaaccttgacaaaagcagcggaatttgaacgggtgcagcacacggaaaaa
gagatcgaacagcagcgcaggatcgagggcgcaaaggatatggcagagcgcgagtatatc
ggtccgaagcgcattgtcattaaaacgcaggggaaagagaatgaggctgcggcaagagga
aaaatattgacagggcagaaaatggcatctgcctgtaagagagctgtggcagcgccagtc
agaaaagcagcagacaactctggaaaaaacgaaaaaaatcatacggaggaaatcattatc
tctccatatgaatttggcgcgataccggacaatgcgatcctccgtgtcaaaggtcattcc
cgaaacaattttgtcatcaaatggatcaaaaagacaaaaagctatgtggaactttccagt
atgtacggacttttacgcatcacaccgatcacaccggaggtgatccgggtcagtttcgtg
aagggtgtcacggaaaaaattggcgatacagcatggaaaggaaaggcggatacagcattt
acatggagtgcaaaagaatccaaaatgctggtagaaattgcaacggaaaaagttaccgtg
cacattgcaaaaaataatggtgcggtctgcttttacaatgagaaaaagcagttactgctt
acggaaaaagcggaggaaccgaggtttcaggaaggcggatgtaactggacattttttgaa
tgggaaaagtccgaacatttgaaagcaaagggactgcttgccgctgattttatggatgtg
acagcaaaagcaaaatacatttcctatggtggaaaaaagttaagaatgccgcttatttta
tcagagaaaggatacgggcttgccattgcatcgaaaggaactgtgctgttttgtgggata
cggacttttggaccttatatcatggcagaggggagtcagagcgattattattttatcagc
gaaaagaaccgtgaaaaattggttgagatctaccagagaacattgactttacgctactgt
tcacaggcaggcattttctga
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