Roseburia rectibacter: H8S51_013850
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Entry
H8S51_013850 CDS
T09206
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rrk
Roseburia rectibacter
Pathway
rrk03030
DNA replication
rrk03430
Mismatch repair
rrk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rrk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H8S51_013850
03430 Mismatch repair
H8S51_013850
03440 Homologous recombination
H8S51_013850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rrk03032
]
H8S51_013850
03400 DNA repair and recombination proteins [BR:
rrk03400
]
H8S51_013850
Enzymes [BR:
rrk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H8S51_013850
DNA replication proteins [BR:
rrk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H8S51_013850
DNA repair and recombination proteins [BR:
rrk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H8S51_013850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
EAP30
tRNA_anti_2
Secretin
Motif
Other DBs
NCBI-ProteinID:
UMY99380
LinkDB
All DBs
Position
complement(2982155..2985625)
Genome browser
AA seq
1156 aa
AA seq
DB search
MSFTHLHVHTEYSLLDGSNKIKEYVSRVKELGMNSAAITDHGVMYGVIDFYKAARAAGIK
PILGCEVYVAPGSRFDRELSHGDDRYYHLVLLAENNKGYQNLMKIVSKGFVEGYYYKPRV
DMEVLETYHEGIIALSACLAGEVQRYLVRGLYEEAKETAYKYEKCFGKGNFFLELQDHGI
PEQKTVNAGLMRMSQETGIELVATNDVHYTYAEDAEPHDILLCLQTGKKLSDENRMRYEG
GQYFVKSEEEMRELFPYAAQAIDNTQKIADRCQVEIEFGVTKLPHFDVPEGYDSWTYLNK
LCHEGLVRRYPDKHEELLPKLDYELSVIQKMGYVDYFLIVWDFINYARTHGIPVGPGRGS
AAGSLVSYTTGITNIDPIRYNLLFERFLNPERVTMPDIDIDFCYERRSEVIDYVIEKYGK
DCVTQIVTFGTLAARGVIRDVGRVMDLPYNFCDTIAKNIPNELNITIDKALIMNPELRSM
YESDETVKRLIDMAKRLEGLPRHTSMHAAGVVISQKAMDEYVPLSRSSDGTITTQFVMTT
IEELGLLKMDFLGLRTLTVISDAVKLVEKNHGIKIDVDNIDYNDKKVLDSIGTGRCDGVF
QLESAGMKNFMKELKPQSLEDVIAGISLYRPGPMDFIPKYIKGKNEPESVTYVCKELEPI
LEPTYGCIVYQEQVMQIVQNLAGYTMGQADNIRRAMSKKKQYVIDAERQNFVYGNEEQGI
KGCITNGISEQAANQIYDSMVDFAKYAFNKSHAAAYAVVAYQTAYLKYYYPVEFMAALMT
SVIDNTRKVAEYIYSCRQMGIKVLSPDINEGEGRFLATKDGIRYGMYAIKSIGRQVIDII
LAEREANGKYITLSDFLSRVAGREVNKRAVENLIKAGACDGLDGNRQQMLLVYNTLIDNL
NQEKKNSLAGQMSLFDLVSEEEKKAYEVRFPNVEEYSKEIKLGFEKEVLGIYLSGHPLEE
YEEKWRKNISAVTADFMLDEETNAVKIKDNQSVVIGGIITEKTIKYTKQNKAMAFITIED
LFGTVEVIIFPRDYEKYSRYLNEDEKVFIAGHANVEEDKNGKLICEKIYSFDDTKRELWL
QFATKEAFEEKEKELYSLLYGSDGNDEIVIYIASPRAMKRLGQNHNVHINPELVGNLTEF
LGEKNVKIVEKSIEKK
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttacacatctgcacgtccatacagagtacagtctgttagacggttcaaataag
ataaaagaatatgtttcaagagtcaaagaactcgggatgaacagcgccgccatcacagat
catggtgtgatgtacggcgtgattgatttttataaggcagcaagggcagccggaatcaag
ccgatcttaggctgtgaggtatatgtagcgcctggatcgagatttgacagggagctttcc
catggagatgaccgttattatcatctggtacttttagcagagaataacaaaggttaccag
aacctgatgaagatcgtttccaaaggatttgtggaaggatattactacaaaccacgtgtg
gatatggaagttttagaaacttatcatgagggaatcattgcattaagtgcctgtcttgcc
ggtgaggtgcagcgctatctggtacgtgggctttatgaggaagcaaaagagactgcatac
aaatatgaaaaatgttttggaaaaggcaacttctttttagaactgcaggatcatggaata
ccggaacaaaagacggtcaatgcaggactgatgcggatgagccaggagacaggtattgaa
ctggtggcgacgaacgacgtgcattatacttatgccgaggatgccgagccgcatgatatt
ttactctgtctgcagaccggaaaaaaactgtccgatgaaaaccgtatgcgttatgagggc
gggcagtattttgtaaaatcagaagaagaaatgcgggaactgtttccgtatgcagcacag
gcgatcgacaatacacagaaaatcgctgacagatgtcaggtggagattgaatttggcgtg
acaaagctgccgcattttgatgtgccggaaggttatgattcatggacttatctgaacaaa
ctctgccatgagggactggtaagacgttatccggataaacatgaggaacttttaccaaaa
cttgactatgaactttccgtcatccagaaaatgggatatgtcgattacttccttattgta
tgggattttattaactatgcgagaacgcacggtattccggttggcccgggaaggggaagt
gctgcgggaagtcttgtttcctatacaacaggaatcaccaatattgatccgatccgttat
aatctgctgtttgagcgtttcttaaatccggaacgcgtgaccatgccggatatcgatatt
gatttctgttacgagagacgaagtgaagttattgattacgttatcgagaaatacggaaaa
gattgtgtgacgcagatcgtgaccttcggtacattagcggcacgtggtgttatccgcgat
gtcgggcgtgttatggatctgccctataatttctgtgatacgatcgcaaaaaacatccca
aatgagctaaacatcacgatcgacaaagcactcataatgaacccggaactgcgttccatg
tatgagtcggatgagacggtaaaaagactgatcgacatggcgaaaagactagaaggtctg
ccgcgccatacctccatgcatgcagccggagtcgtaatctcccagaaggcgatggacgaa
tatgtgccgttgtcgcgaagctctgacggtacgatcacaacacagtttgtcatgaccacg
atcgaggaactcggacttttaaaaatggatttccttggacttcgtaccttaactgtcatc
agtgatgcagtcaaacttgtggaaaaaaatcatggaataaaaattgatgtggataacatt
gattataacgataaaaaagtattagattcgatcggaaccggaagatgcgacggtgtattc
cagttagaaagtgcgggcatgaaaaatttcatgaaagagttaaaaccgcagagcttagag
gatgtcatcgccggcatttccctttaccgtccgggaccgatggattttatacccaaatat
atcaaaggaaaaaatgaaccggagagcgtgacctatgtctgcaaggaattagagccgatc
ttagagccgacgtatggctgcattgtctatcaggagcaggttatgcagatcgtgcagaac
cttgccggttatacaatgggacaggctgataacatccgccgtgccatgagtaaaaagaag
cagtatgtcatcgacgcggagcgtcagaactttgtctatggcaatgaagagcagggcatc
aaaggctgtatcacaaacggaatcagcgagcaggcagcaaaccagatctacgattccatg
gttgattttgcaaaatatgcgttcaataaatcacatgcagccgcttatgcagtggttgcc
tatcagacggcatatttaaaatactattatccggttgagtttatggcagcactcatgacg
tcagtgatcgacaatacaagaaaagtcgccgagtacatttattcctgccgtcagatgggg
atcaaagtgctttccccggatatcaatgagggagaaggacgctttttggcaacgaaagat
ggaatacgctatggcatgtatgcgatcaagagtatcggcagacaggtcattgatatcatt
ttagcagaaagagaggcaaacggtaaatatatcacactttctgattttttaagccgtgtt
gccgggcgggaggtcaataagcgtgcggtcgaaaacctgatcaaagccggagcctgcgat
ggattagacggcaacagacagcagatgctcttagtatataatacgctgatcgacaacctg
aaccaggaaaagaaaaattcacttgcagggcagatgtctttatttgaccttgtatccgaa
gaggaaaaaaaagcgtatgaagtccgtttcccgaatgtggaggaatacagcaaagagatc
aaacttggttttgagaaagaagtccttggaatttacctaagcggtcatcctttggaggaa
tatgaggaaaaatggcgcaaaaatatcagtgcagtgacggcagattttatgctggatgaa
gaaacaaatgccgtaaagatcaaagataaccagagtgttgtcatcggcggcatcatcacc
gaaaagacgatcaaatacacaaagcagaataaagcgatggcatttatcacgatcgaggat
ctgtttggaactgtggaagttatcattttcccgcgtgattatgaaaaatacagccgttat
ttaaatgaggatgaaaaagtctttattgccggacatgctaacgtggaggaagataaaaac
ggaaaactgatctgtgaaaaaatctattcctttgatgatacaaaacgcgaactatggctt
cagtttgcgacaaaagaagcgtttgaggaaaaagaaaaagaattgtattccctgctttat
ggttcagatggaaatgatgagatcgtgatctatattgcgtcgccgcgagccatgaaaaga
cttggacaaaaccacaatgttcatatcaatccggagcttgtcggtaacttgacggaattt
ttgggcgaaaaaaatgtaaaaattgttgaaaagagcattgaaaagaaataa
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