Roseburia rectibacter: H8S51_014805
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Entry
H8S51_014805 CDS
T09206
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rrk
Roseburia rectibacter
Pathway
rrk00260
Glycine, serine and threonine metabolism
rrk00460
Cyanoamino acid metabolism
rrk00630
Glyoxylate and dicarboxylate metabolism
rrk00670
One carbon pool by folate
rrk00680
Methane metabolism
rrk01100
Metabolic pathways
rrk01110
Biosynthesis of secondary metabolites
rrk01120
Microbial metabolism in diverse environments
rrk01200
Carbon metabolism
rrk01230
Biosynthesis of amino acids
rrk01240
Biosynthesis of cofactors
rrk04981
Folate transport and metabolism
Module
rrk_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rrk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
H8S51_014805
09102 Energy metabolism
00680 Methane metabolism
H8S51_014805
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
H8S51_014805
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
H8S51_014805
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
H8S51_014805
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
H8S51_014805
Enzymes [BR:
rrk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
H8S51_014805
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
UMY99562
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All DBs
Position
complement(3213604..3214845)
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AA seq
413 aa
AA seq
DB search
MYTLEDIQAVDMEVANAITDEFERQNSHIELIASENWVSKAVMSAMGSVLTNKYAEGYPG
KRYYGGCECVDVVEELARERAKELFGCEYANVQPHSGAQANMAVQFAILKPGDTVMGMNL
DHGGHLTHGSPVNFSGTYFHIVPYGVNDEGFIDYDKVEEIAMECKPKMIIAGASAYARTI
DFKRFREIADACGAVLMVDMAHIAGLVAAGLHPSPIPYAHVVTTTTHKTLRGPRGGMILS
SQEIADKYNFNKAIFPGIQGGPLMHVIAAKAVCFKEALQPEFKVYQQNIIDNAQALCKGL
LSRDIKIVSGGTDNHLMLVDLTNYDQTGKAVEKLLDSVNITCNKNTIPNDPKSPFVTSGV
RLGTPAVTSRGLNTEDMDQIAEAIAMMIKEGESAADKARAIVKSLTEKYPLER
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgtatacactggaagatattcaggcagttgatatggaagtggcaaatgccattaccgat
gaatttgagcgtcagaacagccatattgagctgatcgcatccgagaactgggtgagcaag
gcagtaatgtcagcaatgggaagcgttcttacgaataaatatgcagagggttatccggga
aaaagatattacggtggatgcgaatgtgtggatgtagtggaggagcttgcaagagagcgt
gcgaaagagctttttggatgtgagtatgccaatgtacagcctcattccggcgcacaggca
aatatggcagtccagtttgccatcttaaaaccgggtgatacagtgatgggaatgaattta
gaccatggcggacatttgacacacggaagcccagtgaacttttccggtacgtatttccat
attgtaccttacggtgtcaatgatgagggatttatcgattatgataaagtagaagagatc
gcaatggagtgcaagccgaagatgatcatcgcaggtgcaagtgcttatgcgagaaccatt
gatttcaaaagattccgtgagatcgcagatgcatgcggagcagttctgatggtcgatatg
gcacatatcgcaggacttgtcgctgcaggacttcatccaagcccaatcccgtatgcacac
gttgtcacaaccacaacacacaagacactgcgtggaccgcgtggaggcatgatcttatcc
agtcaggaaatcgcagacaaatataactttaacaaagctattttccctggaatccagggc
ggacctttgatgcatgtgattgctgcgaaggcagtctgctttaaagaggcacttcagccg
gagtttaaagtataccagcagaatattatcgataatgcacaggcactctgcaagggactg
ttaagccgtgatattaaaatcgtatccggcggtacagacaatcacctgatgcttgttgat
ctgacaaattatgatcagaccggaaaggcagtggagaaacttctcgattctgtcaatatc
acctgcaacaagaacacgatcccaaacgatccgaaatctccgttcgtaaccagcggtgta
cgtcttggaacaccggcagttacctcccgtggtcttaatacagaggatatggatcagatc
gcagaggcgatcgccatgatgatcaaggagggtgagtcggcagctgataaagcgcgtgca
atcgtaaaatctctgacagagaaatatccgttagagagatag
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