Roseburia rectibacter: H8S51_015845
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Entry
H8S51_015845 CDS
T09206
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
rrk
Roseburia rectibacter
Pathway
rrk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rrk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H8S51_015845 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrk03400
]
H8S51_015845 (uvrB)
DNA repair and recombination proteins [BR:
rrk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H8S51_015845 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H8S51_015845 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
SWI2_SNF2
Kinesin
AAA_22
SPESP1
Microtub_bd
UB2H
AAA_5
Motif
Other DBs
NCBI-ProteinID:
UMY99763
LinkDB
All DBs
Position
complement(3472982..3474964)
Genome browser
AA seq
660 aa
AA seq
DB search
MDHFKLHSKYKPTGDQPHAIEELVKGFEEGNQFQTLLGVTGSGKTFTMANVIQALNKPTL
IISHNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPQTDTYIAKDSAINEEIDK
LRLSATAALVERKDVIVVASVSCIYGLGSPEDYLGMMVSLRPGMERDRDDVLRALVDIQY
TRNDMDFHRGTFRVRGDTLEIFPANYGDTAVRVEFFGDEIDRITEIDVLTGEIKCELEHF
AVFPASHYVVPQEKILKACEAIEQELDERIRYFKGEDKLLEAQRISERTNFDIEMLKETG
FCSGIENYSRHLAGLPAGATPHTLMDYFKDDYLIIVDESHITIPQIRGMYAGDQSRKSTL
VDYGFRLPSAKDNRPLNFEEFESKIDQMLFVSATPNVYEDEHELLRTEQIIRPTGLLDPE
VVVRPVEGQIDDLIGEVNKEIKDHHKVLITTLTKKMAEDLTDYMREIGIRVKYLHSDIDT
LERAEIIRDLRLDVFDVLVGINLLREGLDIPEITLVAILDADKEGFLRSETSLIQTIGRA
ARNSEGHVIMYADKITDSMRVAIEETKRRREIQQAYNEEHGITPTTIQKSVRELISVSKK
VAKEEMNFKKDPESMNRDELTKLIADIQKKMQKAAADLNFEAAAEYRDKMVELKSMLRDM
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggatcatttcaaattacattcaaaatataaaccgaccggggatcagcctcatgcgatc
gaagaactggtaaaaggatttgaggaaggcaatcagtttcagactttactgggtgttaca
ggttccggtaagacttttacaatggcaaatgtgattcaggcactgaataagccaacactt
atcatatcccataataaaacactggcagcgcagttatatggggagatgaaagagtttttt
ccggaaaatgcagtggagtattttgtgtcctactatgattattaccagccggaagcatat
gtgcctcagacggatacctatatcgcaaaagactcggcaatcaatgaagaaatagataaa
ctgcgcctttctgcgacagctgcactggtggagcgtaaggatgtgatcgtggtggcgtct
gtttcctgtatttatggtctgggcagcccggaagattatcttggaatgatggtttcctta
agacctgggatggagagagacagggatgatgtactccgcgccctggttgatatccagtat
acaagaaatgatatggattttcaccgcggtacgttccgtgtgcggggggatacgttagag
atttttccggcaaactatggagatacggcagtacgcgtggaatttttcggtgatgagatc
gaccgtattacagagattgatgtgctgaccggagagatcaaatgtgaactggagcatttt
gccgtgttcccggcatcccattacgttgtgccgcaggagaagattttaaaggcatgtgaa
gcgatcgaacaggaattggacgagcgcatccggtattttaaaggtgaggacaagctgctt
gaggcgcagcgtatttcggagaggactaattttgatatagagatgctgaaagaaacggga
ttctgcagcggcattgagaattattcaaggcatcttgcaggacttccggcaggggcgaca
ccgcatacgctgatggattattttaaggatgattatctgatcattgtggatgagtcacat
atcacaatcccacagatccgcggcatgtatgcgggagaccagtcgagaaagtcaacgctg
gtcgactatggtttccgtctgccatcagcgaaggataaccgtccgcttaattttgaagag
tttgagagcaagatagatcagatgctgtttgtatcggcgactccgaatgtatatgaagat
gaacacgaactgctccgtacagagcagatcatccgtccgaccggattacttgatccggag
gttgtggtacgtccggtggaggggcagattgatgatctgatcggcgaggttaataaagag
attaaagatcatcataaggtgctgatcacaacactgacgaagaagatggcagaagatctg
accgattatatgcgtgagattggtatccgcgtgaaatatcttcattcagatattgataca
ttagaacgtgctgagatcataagagatctgcgtctggatgtatttgacgtgcttgtcggc
atcaacctgctgcgagagggactggatataccggagatcacgctggtggcgattttagat
gctgataaagagggattcttaagatcggagacatcactgatacagacgatcggacgtgct
gcgcgtaacagtgagggacacgttatcatgtatgcagataagatcacagattccatgcgt
gtcgcgatagaggagacaaagcggcgtcgtgagatacagcaggcatataatgaagaacat
ggcattacacctacaacgatccagaaatctgtgcgggaactgatcagcgtatctaagaag
gtagcaaaggaagaaatgaatttcaaaaaagatccggaatccatgaaccgggacgagctt
acaaagctgatcgcagatatccagaagaagatgcagaaggctgcggcagacctaaacttc
gaggcggctgcggaataccgcgacaagatggtggaattaaagagcatgctgcgtgatatg
taa
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