Roseovarius rhodophyticola: RZS32_001275
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Entry
RZS32_001275 CDS
T10617
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
rrl Roseovarius rhodophyticola
Pathway
rrl02024
Quorum sensing
rrl03060
Protein export
rrl03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rrl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
RZS32_001275 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RZS32_001275 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RZS32_001275 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rrl02044
]
RZS32_001275 (secD)
Secretion system [BR:
rrl02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
RZS32_001275 (secD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
ACR_tran
QcrA_N
Motif
Other DBs
NCBI-ProteinID:
WYK18545
UniProt:
A0ABZ2TFN1
LinkDB
All DBs
Position
complement(240169..242805)
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AA seq
878 aa
AA seq
DB search
MLQIDLWKRVVIWGLVALGLLLASPNGFYTKVETHNDAMVALEQGATGAELEAQAASWPS
WMPSGLVNLGLDLRGGAHLLAEVQVEDVYQARIEAMWPEIRDLLREERGRVGPIRLQPTD
TAELRVRLVEKPEEIEYAAGLVRGLAQPIFDPLSGVSSSDIDVDVAGDTIVVTLSEAERQ
ASDEQTVRTAREIIERRINEMGTREPTIQRQGADRILIQVPGVGSAAELKEIIGTTAQLT
FQPVVGRTGDPSDPPGAGNEILPSLDEEGVFYIVERAAVVTGEELVDAQPDFDQNGLPAV
SFRFNPAGGRKFGDYTAANIGSPFAIVLDNEVISAPVIQSHIPGGTGIITGRFTVEDSTN
LAVLLRAGALPAELEFLEERTVGPELGADSIEAGKIASIVAFGLVLAFMWASYGLFGLFA
NIALLINVGLIFGLLSLIGATLTLPGIAGIVLTIGMAVDANVLVFERIREELKTAKGPAR
AIELGYEKALSAITDANITTFITALILYAMGSGPVRGFAITLGLGIITSVFTAIFVTRLI
VIIWFERKRPKTVLQGRALRLVPKETSIDFFKRWKMSLGLSGVFIIVAVISFFLQGLNFG
IDFRGGTTIRTESAQTVDIGQYRDAITQLELGDVSITEIFDPTFGPDKNVAMIRIQAQEG
EEAVTPEVIRSVEAALQEVVPDLKFTAVDSVGPKVSGELIQTAVIAVLLAIAAVLVYIWL
RFEWQFAVGAVLALVHDVWLTIGIFSELQIQFDLAIIAALLTIVGYSLNDTVVVFDRVRE
NLRKYKKKDLSEVLNISINETLSRTVMTSVTTLLALMALYVLGGDVIRGFVFAMIWGVIV
GTYSSIFVASAVLLWLGVKRDWSKPDTTAGTQFANVDA
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaaattgacctctggaagcgcgtggtgatttggggcttggtggcgcttgggctg
ctgctggcctcgcccaatgggttctacacaaaggtcgagacgcataacgacgccatggtc
gccctcgaacagggcgcgacgggagcagagcttgaggcacaggcagccagctggccaagc
tggatgccatcgggtcttgtcaatcttgggcttgatctgcgcggtggcgcgcaccttttg
gctgaggtgcaggtcgaggatgtctaccaggcccggatcgaggccatgtggccggaaata
cgggacttgttgcgtgaggagcgcggccgtgtcggccccatccgcttgcaacctacggac
actgcggaactgcgcgtgcgtctcgtcgaaaagcccgaggagatcgaatatgcagccggt
cttgttcgtggtcttgcgcaacccatttttgacccgctttccggtgtgtcctcaagcgat
atcgacgttgatgtcgcaggcgacacaatcgttgtcacgctgagcgaagccgagcggcag
gccagcgatgagcaaaccgtgcgcaccgcgcgcgaaatcattgaacgccgcatcaacgag
atgggcacgcgagagccgaccatccagcgccaaggcgcggatcgtatccttatacaggtt
cccggcgtgggcagtgcggcggaactcaaagagatcatcggcaccaccgcgcagctgaca
ttccagcctgtcgtgggccggacgggcgatcccagtgatccgcccggcgcgggcaatgaa
atcctgccgtccctggacgaagagggggtcttttacatcgtcgaacgcgctgctgtggtc
actggtgaagaactggtcgacgcgcagccggattttgaccaaaacggtctgcctgcagtc
tctttccgctttaacccggcgggtggccgcaaatttggtgactacaccgccgccaatatc
ggcagcccctttgcgattgtgctcgacaacgaggtgatcagcgcgccggtcatccagagc
catattcccggcggcaccggtattatcactggtcggttcacggttgaggacagcaccaac
cttgccgtgcttttgagggcaggggccttgcctgcggaactggaatttctcgaagaacgc
accgtcgggccggaactaggggccgatagcatcgaagcgggtaagatcgccagcatcgtc
gctttcggcctcgtgttggcctttatgtgggcgagctatggtctctttggtctctttgcc
aatatcgcgcttttgatcaacgtgggtcttatattcggcttgctaagccttattggtgct
acgctgacactacccggtattgctggcatcgtgctgaccatcgggatggcggtggatgcc
aatgtgcttgtctttgagcgcatccgcgaggaactcaaaaccgccaaaggcccggcgcgt
gccatcgagttgggctatgaaaaagcactcagcgccattaccgacgccaacatcaccacg
ttcattacggcgctgatcctctatgccatgggctctggccccgtgcgaggctttgccatc
acgctgggtctggggatcatcacgtcggtctttacggcgatcttcgtcacgcgcctgatc
gtgatcatctggtttgagcgcaaacgccccaagactgtgcttcagggccgcgccctgcgt
cttgtgccgaaagaaaccagcatcgatttcttcaagcgctggaaaatgtcactgggcctt
tcgggcgtgttcatcatcgtggcggtgatctcattcttcctgcaaggtctgaacttcggc
atcgatttccggggcggcaccacgatccggaccgaaagcgcgcaaaccgtcgatatcggc
caatatcgcgacgcgatcacacagctggagttaggcgatgtgtcgattaccgagattttt
gatccgacgttcggtccggataaaaatgtcgcgatgatccgtattcaggcacaggaaggc
gaagaagctgtcacgccggaagttatccgatccgtggaggcggcacttcaagaggtcgtc
cctgacctgaaattcactgcagtggatagcgttgggccaaaagtatccggcgaacttatt
caaaccgcggtcatcgccgtgctgctcgcgattgcggcggtgttggtctatatctggctc
aggtttgagtggcagtttgcggtgggcgcggtgcttgctcttgtgcatgatgtgtggctg
accataggcatattctcagagctgcaaattcagtttgacctcgccatcatcgccgccctt
ctgacgattgtgggttattcgctcaacgacacggtggtcgtttttgaccgggtgcgagag
aacctgcgcaagtacaagaaaaaagacctctccgaggtgctcaatatctcgatcaatgaa
acgctcagccggactgtcatgacctcggtcaccacgcttctggcgttgatggcactttac
gtgttgggaggcgacgtgatccggggctttgtctttgcgatgatatggggcgtgatcgtg
gggacctattcctcgatcttcgtggccagtgcggtgcttctctggttgggggtcaagcgc
gactggtccaaacccgataccaccgcaggcacgcagttcgccaacgtagatgcctga
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