Roseovarius rhodophyticola: RZS32_001285
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Entry
RZS32_001285 CDS
T10617
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
rrl Roseovarius rhodophyticola
Pathway
rrl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rrl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RZS32_001285 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rrl01007
]
RZS32_001285 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rrl03016
]
RZS32_001285 (serS)
Enzymes [BR:
rrl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
RZS32_001285 (serS)
Amino acid related enzymes [BR:
rrl01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
RZS32_001285 (serS)
Transfer RNA biogenesis [BR:
rrl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RZS32_001285 (serS)
Prokaryotic type
RZS32_001285 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
WYK18547
LinkDB
All DBs
Position
243365..244657
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AA seq
430 aa
AA seq
DB search
MHDIRAIRENPEAFDAAMARRGVSGASVDILKVDEARRAKILAAETAQADQNKAAKEVGA
AKAKGDEAEFERLRALVGEKKAEVAAMQTEAKALDQELTDLLMGLPNLALDDVPDGEDED
DNVEIKRWGTPRAFDFDAREHFEIEGVKPGMDFETAAKLSGSRFVVMSGGVVRIHRALAQ
FMIDTHVEENGLSETWTPVLVRPEMMYGTGQLPKFGEDSYETTNGWWLVPTAEVTLTNIV
HDSVVEEGYLPRRYVAHTQCFRSEAGSAGKDTSGMLRQHQFEKVEMVSITHPDRSLDEHE
RMTRCAEGILEKLGLPYRTIVLCTGDMGFGARKTHDIEVWLPGQNTYREISSVSVCGDFQ
ARRMNGRFKPADGGKPQFVHTLNGSGLAVGRCLIAVLENGQQADGSVELPDVLHPYLRGK
TRLMADGALG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacattcgtgccattcgcgaaaaccctgaagcctttgatgcggccatggcgcgg
cgtggggtgtcgggggcgtcagtggacatcctgaaggttgacgaggcacggcgcgctaaa
atcctcgccgccgaaacagcgcaggccgatcagaacaaggccgccaaggaggtgggcgcg
gccaaggccaagggcgacgaggccgagtttgagcggctgcgcgcacttgtgggcgagaaa
aaggcggaagtcgcggccatgcagaccgaggccaaggcgctggatcaggaattgaccgat
ctgctcatgggcctgccgaacctggcacttgatgatgtgcccgatggcgaggacgaggac
gataatgtcgagatcaaacgctggggcacgccgcgcgcgtttgattttgatgcgcgcgag
cattttgagatcgaaggcgtgaagccgggtatggatttcgagactgcggcaaagctcagc
ggatcacgtttcgtcgtcatgtcgggtggtgtggtgcgcattcaccgggcgctggcgcag
ttcatgatcgacacgcatgtggaggaaaacgggctctccgagacctggacgcccgtgctg
gtgcggcccgagatgatgtatggcaccgggcagctgccgaagttcggtgaggattcctat
gagaccaccaatggctggtggctggtgccgaccgccgaggtgacgctgaccaatatcgtg
catgacagcgtggtggaggaaggatacctgccccgccgctatgtggcgcatacgcagtgt
ttccgctctgaggcgggaagtgccggcaaggacacgtcgggcatgttgcgtcagcaccag
tttgagaaggtcgagatggtgtcgatcacacatcctgaccggtctttggatgaacatgaa
cgcatgacgcgctgtgccgagggcattctggaaaagcttggtctgccttaccgcacgatt
gttctttgcaccggcgacatgggctttggcgcgcgtaagacgcatgacatcgaggtgtgg
ctgccgggtcagaacacctatcgcgagatttcgtcagtatctgtgtgcggcgattttcag
gcccggcggatgaatggccggttcaagccagccgatggcggcaagccacagtttgtacat
accctgaacgggtctggattggccgtgggccggtgtctgattgcggtgctggagaacgga
caacaggccgatgggtctgtggagctgccagacgtgctgcatccctatctgcgcggcaag
acgcggttgatggcggatggggctttggggtga
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