Roseovarius rhodophyticola: RZS32_001320
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Entry
RZS32_001320 CDS
T10617
Name
(GenBank) efflux RND transporter permease subunit
KO
K18989
multidrug efflux pump
Organism
rrl Roseovarius rhodophyticola
Brite
KEGG Orthology (KO) [BR:
rrl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rrl02000
]
RZS32_001320
Transporters [BR:
rrl02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RZS32_001320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
DDE_Tnp_1_assoc
Motif
Other DBs
NCBI-ProteinID:
WYK18554
LinkDB
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Position
251765..255553
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AA seq
1262 aa
AA seq
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MTGIVDWAAARARMVIAFIVLSILAGTLAYISLPKEGEPDIEIPALFVSVPFPGISAEDS
EKLLVKVMETELADLDGLKEMTGTASEGYAGVALEFEFGWDKTKITADVRDAMSAAEADF
PDGFETYTINEINFSTFPIIIVSLSGPVPERTMARVAKDLQDRLEALDPILEAGIAGNRD
EMVEVIIDPLALEAYNITADELVNVVTNNNRLIAAGEVQSGQGSFAVKIPSSFDETLDIY
NLPVKTNGDRVITLGDLTEINLTFEDRAGTARFNGETTVALQVVKRKGFNIIDTAALIRE
EVAKAERTWPQGLRSVVQVDTSNDQSRIIESMVSQLEGSVLTAIALVMIVTLAALGIRPA
LLVGFAIPTSFLLCFALLAVMGVSVSNIVMFGLILAVGMLVDGAIVVVEYADKKIAEGEG
PMHAYVAAAKRMFWPVVSSTATTLCAFLPMLFWPGVPGQFMQMLPITLIFVLSASLLVAL
VYLPVMGGVTGRTERWFDERIRQIAKGHWLWHLLLLPIAVGAVMLAGAAVPFFMEAISAR
FAALDPTRILGSVAPTLVNVFALAICAVVSGAIGLAGVIAFLVSLMAVFRRLRYVRRAIG
ARVMPERREKIQSGYQRTPFGWFIHLIAANPIAPLIAFCAIFVFVGSVTFYYMGNNRGVE
FFVESEPENAIVQVRARGNLSIEQKDALVREAEAVVLAHPNVLNAFAFAGDGGLDVNTGG
AAPPLDTVGQVQLEITKWEDRPTTYETWFTIPIIGYDVQRRVIDDSADGNRTMDELTEAL
REIPGIQFDILALEQGPASAKPVHLRLKGDNWDELQAFTQEARAQFENTEGLKLIEDTLP
LPGIDWQIDVDVEKAGRYGANVAAVGGMVQLVTRGLQIGTMRIPSSDEEIDIRVRLPEDE
RLLSTLDTLKIRTADGLVPLSNFITRKPVQKLAQIDRVDQKRYFDVKADVIDGLTATVTD
EKGETTEVLMNPNERIAEITKWLESGVVPAGIEWEWTGDTEDQEESGAFLMQAFMGALGL
MFIILLAQFNSIYNAALVLLAVILSTTGVLIGMLVMNQPFSIIMTGTGIVALAGIVVNNN
IVLIDTYQEYSKYMPRIDAITRTAEARIRPVLLTTITTMAGLAPMMFGLSLNFVDGGYTF
NSPTALWWKQLATAVVFGLGIATVLTLVFTPSMLALRIWATTYVLWASQLLAKLSMGRTS
RAARDWALARQAKRQRLPEVIWEDEREPAIEADPEPLRLTFIHRVGKDDGDEPGPGGVRA
AE
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgacggggatcgtcgattgggctgccgcccgcgcgcggatggtgattgcctttattgtg
ctgtcgattctggcaggcacgttggcctatatcagcctgccaaaggaaggtgagccggat
atcgagatcccagcgcttttcgtttctgtccccttccccggcatttcggcagaggatagc
gagaagcttctggtgaaggtcatggagaccgagctggccgatcttgacgggctcaaggaa
atgaccggcaccgcctcggaaggttatgccggggtggcgcttgagtttgaatttggctgg
gacaagaccaagatcactgccgatgtgcgcgacgcgatgagtgccgcggaggccgatttt
ccggacgggtttgaaacctatacgatcaatgagatcaatttcagcacctttcccattatc
atcgtaagcctctcaggcccggtgcccgaacgcaccatggcgcgggtggccaaggatttg
caggaccggctggaggcgcttgatccgattctggaggccgggattgcaggcaatcgcgat
gagatggtcgaggtgatcatcgatccgctggcgcttgaggcctacaacatcaccgctgat
gagctggtgaatgtggtgacaaacaacaaccggttgattgccgccggtgaggtgcaaagc
ggtcaggggtcattcgcggtcaaaattccgtcttcattcgacgaaacgctcgatatctac
aatctgccggtcaaaaccaatggcgacagggtcattacactgggcgatctcaccgagatt
aacctgacttttgaggatcgtgcgggtacggcacggtttaatggcgagaccacagtggcg
ttgcaggtggtcaaacgcaaaggcttcaacattattgataccgctgcactcattcgtgag
gaagtggcaaaggccgaaagaacctggcctcagggactacgctccgtggtgcaggtcgat
acgtccaacgatcagtcacgcattatcgagtccatggtgagccagctggaaggctccgtt
ctgacagcgattgcgcttgtgatgatcgtaacgctggcggcgttgggcatccgcccggcc
ttgttggttggctttgcgatcccgacatcgttcctgctttgcttcgcccttttggccgtg
atgggcgtgtcagtctcaaacatcgtgatgttcggacttattctggctgtgggtatgctg
gtcgacggcgccattgtcgtggtggaatacgccgacaaaaagatcgcggagggcgaaggc
ccgatgcatgcctatgtggcagcggccaaacggatgttctggccggtggtaagctcaacc
gccaccacgctctgtgcctttcttccgatgcttttctggccgggcgtgccggggcagttc
atgcagatgttgccaattacgctgatcttcgtgctgtccgcctcgctcttggtggcactg
gtctatctgccggtgatgggcggtgtgaccgggcgcacagaacggtggtttgacgaacgt
attcgccagatcgccaagggacactggctatggcacctgctcttgctgcccatcgctgtg
ggtgcggtcatgctggctggtgcggctgtgccgtttttcatggaagctatcagcgcaaga
tttgcggctctagatccaacgcgtatccttgggtcggttgcgccaacccttgtgaacgtc
tttgcattggcaatttgcgcggtcgtctccggggccatcggtctggccggtgtgatcgcc
ttcctagtcagccttatggcggttttccggcgtctgcgctatgtgcgtcgcgcaattggt
gcgcgggtcatgccagagcggcgggaaaaaatccaatcaggctatcagcgcacccccttt
ggctggttcatccatctcatcgccgccaaccctattgcgccgctgatcgcgttttgcgcg
attttcgtctttgtgggatcagtcacgttctactacatgggcaacaatcgcggcgtggaa
ttctttgtcgagtccgagccagagaatgccattgtgcaggttcgcgccaggggcaacctg
tcgattgaacaaaaagacgctctggtgcgcgaggccgaagcggttgttctggcccatccc
aacgtgctcaacgcctttgcctttgccggggatggcggattggacgtgaacacaggtggg
gccgcgccgccgcttgataccgttgggcaggtacagcttgagatcaccaagtgggaagat
cgccccacaacctacgagacctggttcacaattccgatcattggctatgacgtgcagcgc
cgtgtcattgacgacagtgccgatggcaatcggaccatggatgaattgaccgaagctctg
cgtgagattccgggtatccagtttgatattctcgcattggagcaaggtccggcctcggcc
aagccggtgcacctgcggctcaagggcgacaactgggacgagttgcaagctttcacgcag
gaagcgagggcgcagtttgaaaacactgaaggtttgaaactgatcgaagataccctgccc
ctgcccggtatcgactggcaaatcgacgtcgatgtggaaaaggccgggcgctacggggcc
aacgtggccgccgtgggcggcatggtacagcttgtgacgcgcgggctgcagatcggtacg
atgcgcatcccaagctcggatgaggaaatcgacatccgcgtgcgcctgcccgaggatgag
cgtctcttgtcgacgctggatacgctcaagatccgcacggcagatgggcttgtaccgctg
tcgaacttcatcacccgcaagccggtgcagaaactggctcagatcgaccgcgtggatcag
aagcggtatttcgacgtcaaggccgatgtgattgacggtttgaccgcgacggtcacggat
gaaaaaggcgagaccaccgaagttctgatgaaccccaatgagcggattgccgagatcacc
aaatggctggaaagtggcgtggtgccggcgggcatcgaatgggaatggaccggtgatacc
gaggatcaggaggaatccggcgccttcctgatgcaggcctttatgggtgccttggggctg
atgttcatcatcctgctggcgcagttcaactcgatctataacgccgcgctggtgcttttg
gcggtgatcctgtcgaccacgggtgttctgatcgggatgctggtaatgaaccagccgttt
tcgatcatcatgaccggcacaggcatcgtggctttggcggggatcgtggtgaacaacaat
atcgttctgattgatacctatcaggaatactcgaagtacatgccgcggattgacgcgatc
acgcgcacggcggaggcgcgtattcgacccgtgctgctgaccacaatcaccacgatggcc
ggtcttgcgccgatgatgttcgggctcagcctcaactttgtcgatggcgggtatacattt
aacagccccactgccttgtggtggaagcagctggccacggcggtggtctttggccttggt
attgcgacggttctgacgcttgtctttacgccgtctatgctggccttgcgcatttgggcc
accacctacgtgctctgggcctcacagcttctggccaagctgtccatgggccgcaccagc
cgcgccgctcgtgactgggcactggcccgacaagccaagcggcagcgcctgccggaggtg
atctgggaagacgaacgcgagcctgcgattgaggccgatcctgagcctctgcgcctgacg
ttcattcatcgggtgggcaaggatgatggagatgaaccggggcctggaggcgtacgagcg
gcagagtag
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