Roseovarius rhodophyticola: RZS32_002175
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Entry
RZS32_002175 CDS
T10617
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
rrl Roseovarius rhodophyticola
Brite
KEGG Orthology (KO) [BR:
rrl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rrl03032
]
RZS32_002175 (ihfB)
03036 Chromosome and associated proteins [BR:
rrl03036
]
RZS32_002175 (ihfB)
03400 DNA repair and recombination proteins [BR:
rrl03400
]
RZS32_002175 (ihfB)
DNA replication proteins [BR:
rrl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RZS32_002175 (ihfB)
Chromosome and associated proteins [BR:
rrl03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
RZS32_002175 (ihfB)
DNA repair and recombination proteins [BR:
rrl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
RZS32_002175 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
WYK18715
UniProt:
A0ABZ2TJV8
LinkDB
All DBs
Position
complement(427027..427311)
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AA seq
94 aa
AA seq
DB search
MIRSELIQKIADENPHLYQRDVERIVNTVFNEITSAMANGNRVELRGFGAFSVKKRDART
GRNPRTGESVPVEEKHVPFFKAGKLLRERLNGKA
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgatccgatccgaacttattcaaaagatcgcagacgaaaacccacatctttatcaacgc
gatgtcgagcggatcgtaaacaccgtcttcaatgaaatcaccagcgccatggccaatggc
aatcgggttgagcttcgcggtttcggtgccttctcggtgaaaaagcgcgatgcccgcaca
ggccgcaatccccgcactggcgaatccgtcccggtcgaggaaaaacacgtccccttcttt
aaggccggcaagctgctgcgcgaacggctgaacgggaaagcgtaa
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