Roseovarius rhodophyticola: RZS32_002350
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Entry
RZS32_002350 CDS
T10617
Name
(GenBank) oligopeptide/dipeptide ABC transporter ATP-binding protein
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
rrl Roseovarius rhodophyticola
Pathway
rrl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rrl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RZS32_002350
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rrl02000
]
RZS32_002350
Transporters [BR:
rrl02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RZS32_002350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_29
AAA_22
SMC_N
nSTAND1
AAA_16
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
WYK18747
LinkDB
All DBs
Position
462312..463277
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AA seq
321 aa
AA seq
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MSALISVRNLTRVFDVSKPWLNRVIERLPVALLTAVSDVSFDIEEKTVYALVGESGSGKS
TIGKIVVGLVPPSEGAVEISGVDLATERDDAKVDAVRSDIQMIFQDPYASLNPRWRVRDV
IAEPVAARGGDTTGLAERLLEQVGLSAADASKYPHEFSGGQRQRICIARALASGPKIIVC
DEPTSALDVSVQSQVLNLMSDLREDLGLTYLFISHDLTVVQHMADRIGVLYLGRLVEEAP
RDALFESPKHPYTRMLFDAAPRMDAFGREVDPPKGEIPDAINPPTGCAFHPRCPLAVDRC
SQERPEMRVIGETRVACHLAE
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctttgatctcggtgcgtaacctgacgcgtgtttttgacgtctcaaagccctgg
ctcaaccgtgtgattgaacgtctgcccgtggcgcttctgactgccgtctcggatgtgagt
ttcgacatcgaggaaaagacggtttacgcgctggttggcgaaagcgggtcgggcaaatcg
accattggtaagattgtggtcggtcttgtgccgccttccgagggcgcggttgagatcagc
ggtgttgatctggccacagagcgcgatgacgccaaggtcgatgcggtgcgctctgacatt
cagatgatttttcaggacccttatgcgtcgctcaatccgcgctggcgggtgcgcgacgtc
attgccgagccggtggcggcgcggggtggcgacacgacgggtctggctgagcgtttgctg
gaacaggtggggctgtcggcggcagatgcctcaaaatatccgcatgaattctctggcggt
cagcgacagcggatttgcatcgcgcgcgcgctggcctctggccccaagatcattgtctgc
gatgaaccgacgtcggctttggatgtgtcggtgcaaagtcaggttctcaacctgatgtcg
gacctgcgcgaagacctgggcctgacttatctcttcatcagtcatgacctcacggtggtc
cagcatatggccgaccggatcggcgtgctctacctcggccgtctggttgaggaggcgccg
cgcgatgcccttttcgaaagccctaaacacccctacacccggatgctttttgatgccgcc
ccccgcatggatgcctttgggcgtgaggttgatccgcccaaaggtgaaattcccgatgcc
ataaacccgccaacaggttgcgcgtttcatccgcgttgtccgctggccgtggaccgctgc
agtcaggagcgcccggagatgcgggtgatcggcgagacgcgtgttgcgtgccatctggca
gaatag
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