Roseovarius rhodophyticola: RZS32_003220
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Entry
RZS32_003220 CDS
T10617
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
rrl Roseovarius rhodophyticola
Brite
KEGG Orthology (KO) [BR:
rrl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rrl03021
]
RZS32_003220 (rpoH)
Transcription machinery [BR:
rrl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RZS32_003220 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
UCR_14kD
Sigma70_r3
HTH_25
Motif
Other DBs
NCBI-ProteinID:
WYK18911
LinkDB
All DBs
Position
complement(640983..641879)
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AA seq
298 aa
AA seq
DB search
MSNYANLPAPSPEAGLNRYLQEIRKFPLLEPEQEYMLAKAWVEKEDTDAAHQMVTSHLRL
AAKIAMGYRGYGLPQAEVISEANVGLMQAVKRFDPEKGFRLATYAMWWIRASIQEYILRS
WSMVKLGTTSAQKKLFFNLRKAKARIGALEEGDMHPDNVARIAHDLGVTEDEVISMNRRM
SGGDASLNATVGSEGEGTMQWQDWLEDEDADQAGDYEAKDELDARRELLAEAMSVLNDRE
KDILTQRRLSDKTITLEDLSAQYDVSRERIRQIEVRAFEKLQKRMRSLAQEKGMLASV
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagtaactacgcaaatcttcccgcaccgtcaccagaggccggtctgaaccgctatttg
caggaaatccgcaaattcccgctgttggaaccggaacaggaatacatgctggccaaggcc
tgggtcgagaaagaagataccgacgccgcccatcagatggtcacaagccacctgcgcctg
gcggccaaaattgccatgggctaccgcggctatggcctgccgcaggccgaggtcatctcg
gaggcgaatgtaggcctgatgcaggcggtgaaacgctttgacccagaaaagggtttccgt
ctggccacctatgccatgtggtggatccgcgccagcattcaggaatacatcctgcgcagt
tggtcgatggtcaaactgggcacgacaagcgcgcagaaaaagcttttcttcaacctgcgc
aaggccaaggcgcgcattggcgcgttggaagaaggggatatgcaccccgacaatgtggcg
cgcattgcgcatgatttgggcgtcaccgaagacgaagtgatcagcatgaaccgccgcatg
tcgggtggcgatgcgtcattgaatgccacagtgggctccgaaggcgagggcaccatgcaa
tggcaggattggctcgaagacgaggatgccgatcaagcgggtgactacgaggccaaggac
gagttggacgcgcgtcgtgagcttttggctgaggcgatgtcggtgctcaatgaccgtgaa
aaagatatcctgacgcagcggcgcctgagcgacaagaccatcacgcttgaggacctgagt
gcgcaatacgacgtcagccgcgaacgcatccgccagattgaagtgcgcgcgtttgagaag
ctacaaaagcgcatgcggtccctggcacaggagaagggcatgttggcctcagtctga
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