KEGG   Roseovarius rhodophyticola: RZS32_004090
Entry
RZS32_004090      CDS       T10617                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
rrl  Roseovarius rhodophyticola
Pathway
rrl03030  DNA replication
rrl03430  Mismatch repair
rrl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rrl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RZS32_004090
   03430 Mismatch repair
    RZS32_004090
   03440 Homologous recombination
    RZS32_004090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rrl03032]
    RZS32_004090
   03400 DNA repair and recombination proteins [BR:rrl03400]
    RZS32_004090
Enzymes [BR:rrl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RZS32_004090
DNA replication proteins [BR:rrl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RZS32_004090
DNA repair and recombination proteins [BR:rrl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RZS32_004090
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 DEDDh_C RNase_H_2 CAF1
Other DBs
NCBI-ProteinID: WYK19072
LinkDB
Position
complement(808650..810080)
AA seq 476 aa
MFTRLSLRLRIFLFFGLLALGAALLAAGALYFGWARAETGVPSAPFVTALILFAFLNTAL
IAGIWLLFDENVAKPIDKLASELRLRAHSGVDKEVETDAAKYLGDLAPAANAVSATLNTN
VVDTAAQVARETERLQAETARLTALLTEIPLATILVNPAHEIVLYDGQAAEVLAQIAPPR
LKAPLTDYFDAEGLASAQAKLAKADAEISTQLADLSGERSFNVSLKPLATNGYMLILDAK
TVDTGSRSPRPLVYDFDLLDSGQTVDIMNTELRSLCFVAFDTETTGLSPQTDDVVQIGAV
RVLNGRIVAGEILDSYVNPGRPIPPASTKVHRVTNDHVRGAPDFVTAGRQLHHFARDAVL
VAHNAPFDLAFLHRFAAQMDVEWSHPVLDTVLLSAVVFGTTEQHSLDALCNRLSVSIPAE
LRHTALGDAQATAEALVKLIPLLEGKGLVTFGDVIAETKKHGRLLKDMNLTPPNSG
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgttcacccgtctcagccttcgcctgcgcattttcctgttcttcggccttttggcgttg
ggtgcggcgctgttggcggctggggcgctttacttcggctgggcgcgcgccgaaacgggg
gtgccatcggccccctttgtcacagcacttatcctgtttgcttttctcaacacggccctg
atcgcgggcatctggcttttgttcgatgagaacgtcgccaagccaattgataagctcgcc
tccgagttgcggcttcgtgcgcattcaggtgtcgacaaggaagttgaaaccgacgccgcc
aagtaccttggtgatctggctcctgccgccaatgccgtctcggcgacgctgaacacaaat
gttgtggatacggccgcgcaggttgcccgcgaaaccgaacggcttcaggccgaaacggcg
cgacttaccgcgcttttgacagagatcccactcgccacgatcctggtcaatccggcgcat
gaaattgtgctctacgatggtcaggccgctgaagtgcttgcacagatcgcgccaccgcgt
ctgaaagcgccgttgacggactatttcgacgctgaaggccttgcaagtgctcaagcgaaa
ctggccaaggccgacgcggaaatatccactcagcttgcagatctttccggcgaacgctcc
ttcaatgtcagcctgaagccattggcaaccaacgggtatatgctcatcctggacgccaaa
accgtcgacaccggctctcgcagcccgcgtccactggtctatgatttcgatttactggac
agtggccaaaccgttgacattatgaatacagaacttcggtctttgtgtttcgtcgcgttt
gacaccgaaaccacaggtctgtctccccagactgatgatgttgttcaaatcggtgccgtt
cgcgtgttgaatggccgtattgtcgcgggtgagattttggacagctatgtcaatccaggc
cgccccattccaccagcctcgaccaaagtgcaccgtgtcacaaatgaccatgtgcgcggt
gcgccggatttcgtcaccgccggccgacaacttcatcactttgcccgcgacgcggttctt
gtggcccacaatgcgccgtttgaccttgcctttcttcaccggttcgcagcgcaaatggat
gtagaatggagccatcccgttttagatacagtgctgctgtctgccgtggtttttggaaca
acggagcagcattctctagatgcgctctgcaatcggctttccgtcagcataccagcagag
ttgcgccacactgccttgggcgacgctcaggcaaccgcggaggcgttggtcaaactgatc
ccgctgttggagggcaaaggtcttgtcacctttggagatgtcatcgctgagaccaaaaag
cacggtcgccttctaaaagatatgaaccttacaccgccaaattcgggatga

DBGET integrated database retrieval system