Entry |
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Name |
(GenBank) 3'-5' exonuclease
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KO |
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Organism |
rrl Roseovarius rhodophyticola
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:rrl00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RZS32_004090
03430 Mismatch repair
RZS32_004090
03440 Homologous recombination
RZS32_004090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:rrl03032]
RZS32_004090
03400 DNA repair and recombination proteins [BR:rrl03400]
RZS32_004090
Enzymes [BR:rrl01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RZS32_004090
DNA replication proteins [BR:rrl03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RZS32_004090
DNA repair and recombination proteins [BR:rrl03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RZS32_004090
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(808650..810080)
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AA seq |
476 aa
MFTRLSLRLRIFLFFGLLALGAALLAAGALYFGWARAETGVPSAPFVTALILFAFLNTAL
IAGIWLLFDENVAKPIDKLASELRLRAHSGVDKEVETDAAKYLGDLAPAANAVSATLNTN
VVDTAAQVARETERLQAETARLTALLTEIPLATILVNPAHEIVLYDGQAAEVLAQIAPPR
LKAPLTDYFDAEGLASAQAKLAKADAEISTQLADLSGERSFNVSLKPLATNGYMLILDAK
TVDTGSRSPRPLVYDFDLLDSGQTVDIMNTELRSLCFVAFDTETTGLSPQTDDVVQIGAV
RVLNGRIVAGEILDSYVNPGRPIPPASTKVHRVTNDHVRGAPDFVTAGRQLHHFARDAVL
VAHNAPFDLAFLHRFAAQMDVEWSHPVLDTVLLSAVVFGTTEQHSLDALCNRLSVSIPAE
LRHTALGDAQATAEALVKLIPLLEGKGLVTFGDVIAETKKHGRLLKDMNLTPPNSG |
NT seq |
1431 nt +upstreamnt +downstreamnt
atgttcacccgtctcagccttcgcctgcgcattttcctgttcttcggccttttggcgttg
ggtgcggcgctgttggcggctggggcgctttacttcggctgggcgcgcgccgaaacgggg
gtgccatcggccccctttgtcacagcacttatcctgtttgcttttctcaacacggccctg
atcgcgggcatctggcttttgttcgatgagaacgtcgccaagccaattgataagctcgcc
tccgagttgcggcttcgtgcgcattcaggtgtcgacaaggaagttgaaaccgacgccgcc
aagtaccttggtgatctggctcctgccgccaatgccgtctcggcgacgctgaacacaaat
gttgtggatacggccgcgcaggttgcccgcgaaaccgaacggcttcaggccgaaacggcg
cgacttaccgcgcttttgacagagatcccactcgccacgatcctggtcaatccggcgcat
gaaattgtgctctacgatggtcaggccgctgaagtgcttgcacagatcgcgccaccgcgt
ctgaaagcgccgttgacggactatttcgacgctgaaggccttgcaagtgctcaagcgaaa
ctggccaaggccgacgcggaaatatccactcagcttgcagatctttccggcgaacgctcc
ttcaatgtcagcctgaagccattggcaaccaacgggtatatgctcatcctggacgccaaa
accgtcgacaccggctctcgcagcccgcgtccactggtctatgatttcgatttactggac
agtggccaaaccgttgacattatgaatacagaacttcggtctttgtgtttcgtcgcgttt
gacaccgaaaccacaggtctgtctccccagactgatgatgttgttcaaatcggtgccgtt
cgcgtgttgaatggccgtattgtcgcgggtgagattttggacagctatgtcaatccaggc
cgccccattccaccagcctcgaccaaagtgcaccgtgtcacaaatgaccatgtgcgcggt
gcgccggatttcgtcaccgccggccgacaacttcatcactttgcccgcgacgcggttctt
gtggcccacaatgcgccgtttgaccttgcctttcttcaccggttcgcagcgcaaatggat
gtagaatggagccatcccgttttagatacagtgctgctgtctgccgtggtttttggaaca
acggagcagcattctctagatgcgctctgcaatcggctttccgtcagcataccagcagag
ttgcgccacactgccttgggcgacgctcaggcaaccgcggaggcgttggtcaaactgatc
ccgctgttggagggcaaaggtcttgtcacctttggagatgtcatcgctgagaccaaaaag
cacggtcgccttctaaaagatatgaaccttacaccgccaaattcgggatga |