Roseovarius rhodophyticola: RZS32_006525
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Entry
RZS32_006525 CDS
T10617
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rrl Roseovarius rhodophyticola
Pathway
rrl00521
Streptomycin biosynthesis
rrl00523
Polyketide sugar unit biosynthesis
rrl00525
Acarbose and validamycin biosynthesis
rrl00541
Biosynthesis of various nucleotide sugars
rrl01100
Metabolic pathways
rrl01110
Biosynthesis of secondary metabolites
rrl01250
Biosynthesis of nucleotide sugars
Module
rrl_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rrl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RZS32_006525 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RZS32_006525 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
RZS32_006525 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RZS32_006525 (rfbB)
00525 Acarbose and validamycin biosynthesis
RZS32_006525 (rfbB)
Enzymes [BR:
rrl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
RZS32_006525 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
adh_short_C2
NmrA
Sacchrp_dh_NADP
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
WYK19513
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Position
1274879..1275928
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AA seq
349 aa
AA seq
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MKILVTGGAGFIGSAVVRLAVARGHEVVNLDALTYAACLDNVADAALSNLYSFEHADIRD
RAALDRIFSTHQPDAVMHLAAESHVDRSIDGPRDFIETNITGTYNMLEAARAYWVQAGKP
DTFRFHHISTDEVYGSLPDNPSAQFTESTPYDPRSPYSASKAASDHLVRAWQETYGLPVV
LTNCSNNYGPYHFPEKLIPVTILNALGGKPLPIYGDGSNIRDWLYVEDHADALLLVLEKG
KLGRSYNIGGENERTNLELVKTLCSILDDLRPRSDGKLYADQIEFVTDRPGHDARYAIDP
SRIRDELGWRPSVTVEEGLRKTVKWYLDNEAWWQALLNRDGVGKRLGTG
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatccttgtcaccggtggcgccggttttatcggatcagcggttgtacgtcttgcc
gtggcgcgtgggcatgaggtggtcaacctcgacgcgctgacctatgccgcttgcctcgac
aatgtggccgatgccgctctaagcaacctctacagtttcgagcatgccgatatccgtgac
cgtgccgcacttgaccgtattttttcgacccaccaaccagatgccgtgatgcacttggcc
gccgaaagtcacgtggaccgttccattgacggtccacgtgatttcatcgaaaccaacatc
accggcacctacaacatgttagaggccgcgcgcgcatattgggtgcaagcgggtaaaccc
gataccttccggtttcatcatatttcgacagacgaagtatatggctcattgccagataac
ccatccgcgcagttcacggaatccacaccctatgacccgcgcagcccctattccgcgtcc
aaggccgcgtccgaccatctggtccgtgcctggcaggaaacctatggtctgccggttgtt
ctgaccaactgctcaaacaactacggcccctaccacttcccggaaaagctgatcccggtc
acgatccttaatgcgcttggcggtaagccgctcccgatctatggcgatggctcaaacatc
cgggactggctctatgttgaagaccacgctgatgcgcttttgttggtgctggagaaaggt
aaacttggtcggtcctataacatcggcggagagaacgagcgcaccaacctggaattggtt
aaaacgctctgcagtatccttgatgacttgcgcccgcgcagcgatggcaaactctacgca
gaccagattgaattcgtgaccgaccggccggggcacgatgcccgctatgccatcgaccct
agccgcatccgtgacgagctgggttggcggccttctgtgacggtcgaggaaggccttaga
aaaactgtgaaatggtatctcgacaacgaagcctggtggcaggctctcctcaaccgtgat
ggcgttggaaaacgactcggcaccggctga
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