Roseovarius rhodophyticola: RZS32_009850
Help
Entry
RZS32_009850 CDS
T10617
Name
(GenBank) CHRD domain-containing protein
Organism
rrl Roseovarius rhodophyticola
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHRD
HemolysinCabind
Motif
Other DBs
NCBI-ProteinID:
WYK16739
UniProt:
A0ABZ2TAQ6
LinkDB
All DBs
Position
1949755..1954656
Genome browser
AA seq
1633 aa
AA seq
DB search
MLFQLLSSLRARLLTSSSLAQETTRDGQTLFNNFFQSTVVDDTPAFVLANDFSRLLNFGE
ITTNNAVAAVLAEGEDADIFNFRSGSIEANNGADVLTATGVQVTGSADIRNFGEIAGEFN
GVQFAGAQSSGSLDNFRGGVISSDSRAVDIQGEGIDVRNFGDIVGTGDQRNGTIYTNSTA
EDITISNFSGGTIDAGEDNQGAGISLQVGDEVGDVVETDIFNGVGGVIQGRGQAASNTTL
AGDGIRIDDGAEGAILDTEIVNAGLISSESEQGTAGGIRIADGANAEGEILNTSTGVIEG
AANGLYIGQGEHDIDVLNFGTIQSDSRAVNIDGTGVNLVNGGDILGTDDQRNGTVYADGT
ADDFEVNNLATGTIDAGEGNQGSGFGVEIGGAEDGANSFTLDNAGTIQGRGNAAAGTNAA
GDGVRIGNVGNVGTTDAVINNTGTIDSEGANGTVAGVRFVNGVSFQGEFNNSGDISGVQN
GVYFGNPVAGEGADHTGGVFNNLEGGTISSDSRAFNIDGIGLEVNNAGDIIGTASQRNGT
VYADGTAQDFTFNNQETGVIDAGEGNEGSGFGAEIDGENTFELNNEGTIQGRGNAAAGVN
AAGDGIRIGNVGNSGTFDGTIVNSGLVASEGANGTVGAFRSVNNINFQGELINEEGGVFE
GGQNGVYFGTGDHTGGSFVNRGTVTSDSRALNIDGEGLEVVNEGDILGTGNQRNGTVYAD
GTADNYSFTNSGTVDAGLGNNGSAVSLQTGDEAGDVVSAVIVNEEGGVFQGRGDAVEGNQ
IGDGLRLFTSQEDASFAGVVINEGVISGSEDSDAAAGIRVDGGLNLVGAILNEGEINGAV
NAIDASDAGSVTIVNDDEGVINGNVLLSDGEDIFVDLGTTNGDIVGGAGDDVVIAGDADN
VITGGLGNDFIDGGDGFDTADFSDLDVAVTVELDENGNGTATRDVGFNVSVVNAVVANPA
QFGSAIADGAAFVDQAVLGNLYYNIHTADFPGGEIRGQLLVDSDETVGNIRTIELSGGLD
ASQEPGPTSDSEATGDATVVITQNLETGEVTYSSELSVVGLNEADLLTPIPGVVSAIHLH
NAPAGQNGPVVQDTLLDAGATLDVNATGGTGVIGEDVIDNQIEVDVLSSIEAVIGTDDGD
VIIGVEDAPVVADFSDLDVAVTVSVDENGNGTATRDTGFTVVVEDAVIDSPGQFGSAIAN
GAQFVEQAVAGNLYYNIHTADFPGGEIRGQLSVVSDTGRGHDRVIELAGSLDASQEPGPT
SDSEATGEATVTISFDEEGNVLYSSELSVVGLNEADLLTPIPGVVSAIHLHNAPAGQNGP
VVQDTLVDAGATLDVNATGGTGVIGEDVIDNQIEVIELIGVDQVIGSGDADTIVLDQFDG
VTVDLDLSGPAPNPAAVGGEGPQDGAIIQDGEILIEFDDFENVTGSDGNDLILGNNEINV
LEGGDGNDAIHSFGGADIIDGGEGTDTALFTAGGGVVLDLDEEGNGVATLNAPEGATLDS
VFNFENINGSNNAGSANGGADILSGNSGANTLNGQAGDDVLNGEGGDDVLIGGAGADTFI
FEGAFGNDIIQDFEAGVDSLQFGDFGSAFGLSAGPSVSVSQDGDDALISFGDQGSVRLAG
VSSSDLNDDDFVA
NT seq
4902 nt
NT seq
+upstream
nt +downstream
nt
atgcttttccaacttctatccagcctgcgcgcacgtcttttgacgtcgtcgtcgttggcg
caagagacgacccgcgacggtcagaccttgtttaacaacttcttccaaagcacggttgtg
gatgacacgcccgcgtttgttttggcgaacgacttttcgcgtttgctgaactttggtgag
atcacaaccaacaacgctgtggcggccgttctggctgaaggtgaggatgctgatatcttc
aacttccgctccggcagcatcgaagcgaacaacggcgcagatgtcttgacggccacaggc
gtccaagtgaccggaagcgcggacatccgcaactttggtgaaatcgctggtgagtttaac
ggtgttcagttcgctggtgcacaaagctccggcagcctcgataacttccgtggcggcgtc
atttcttccgacagccgcgccgttgacatccaaggcgaaggcattgacgtccgtaacttc
ggcgacatcgtcggaactggcgatcagcgcaacggtacgatctacaccaacagcactgcc
gaagacatcaccatttcgaacttctcgggcggcacaatcgacgccggtgaagacaaccag
ggcgcgggtatctcgctccaggttggtgatgaagttggtgacgtggtcgaaacggatatt
ttcaacggtgtgggtggcgtcattcagggccgcggtcaggccgcgtccaacacaacgctc
gccggtgacggcatccggattgacgatggcgcagaaggcgcgatcctcgacaccgagatt
gtcaacgctggtctgatctcttccgagagcgaacaaggcacagccggtggtatccgcatc
gcggatggggccaatgcggaaggcgagatcctcaacacgtccacaggtgtgatcgagggt
gctgctaacggtctttacatcggtcagggcgaacatgacatcgacgtgctgaacttcggc
acaatccaatccgacagccgcgcggttaacatcgacggcacaggcgtaaacctggtcaac
ggtggtgacatccttggcacagacgatcagcgcaacggcacagtatacgccgatggcaca
gctgacgatttcgaagtcaacaacctggccactggcacaatcgacgccggcgaaggaaac
cagggctcaggctttggtgttgaaatcggtggtgcggaagatggggcgaattcgttcacc
ctagataacgcaggcaccattcaaggccgtggcaatgccgcagctggcaccaatgccgct
ggcgacggtgtgcgtatcggtaacgttggcaatgttggaacaaccgacgctgtgatcaac
aacacaggcaccatcgactccgaaggggccaacggcacggttgccggtgttcgctttgta
aacggtgtgtccttccaaggtgagttcaacaactccggcgatatctccggtgttcagaac
ggtgtttattttggtaacccagtggctggcgaaggcgcagatcacactggtggtgtgttc
aacaacctcgaaggcggaaccatttcgtctgacagccgtgcgttcaacattgatggcatt
ggccttgaagtgaacaacgcaggtgacatcatcggcacagccagccagcgcaacggcact
gtctatgcggatggcacagcccaggacttcaccttcaacaaccaagaaaccggtgtcatc
gacgcaggtgaaggcaatgaagggtctggctttggtgccgagattgacggtgagaacacc
ttcgagcttaacaacgaaggtacaatccagggtcgcggcaacgctgctgctggtgtcaac
gctgcaggcgacggcatccggattgggaacgtcggcaactccggcacgtttgacggaacg
atcgtcaactctggtctggtggcctctgaaggtgccaatggcacagtcggtgcgttccgg
tccgtcaacaacatcaacttccaaggtgagctgatcaacgaagaaggtggtgtgtttgag
ggtggccagaatggcgtctacttcggcactggtgatcacacaggcggttcgtttgtaaac
cgtggcactgtgacctccgacagccgcgcgctcaacatcgacggcgaaggtctcgaagtt
gtcaacgaaggcgacatcctcggcaccggcaaccagcgcaacggcactgtctatgctgat
ggtactgctgacaactactccttcaccaactccggcacggttgatgctggccttggcaac
aacggatctgctgtttcgctgcaaacaggtgatgaagcgggtgacgttgtctcggctgtg
atcgtcaacgaagaaggcggtgtcttccaaggtcgcggcgacgcggttgaaggaaatcag
attggtgacggcctgcgtctcttcacaagccaggaagatgcgtctttcgcaggtgttgtg
atcaacgaaggcgtgatctccggctctgaagattctgatgccgctgctggtatccgggtg
gacggtggtctgaaccttgttggtgccatcctcaatgagggtgaaatcaacggcgcagtc
aacgcaatcgatgcatcagacgctggttcagtgacaatcgtcaacgacgatgagggtgta
atcaacggcaacgttctgctgagcgacggcgaagacatctttgtcgatctgggcacaaca
aacggcgacatcgtcggcggcgcaggtgatgacgttgtcatcgcaggtgatgcagacaat
gtgatcaccggcggtctgggcaatgacttcatcgacggtggtgatggctttgacacagca
gacttctctgatctggacgttgctgtcacagttgaactggacgaaaacggcaatggtaca
gccacacgtgacgtaggcttcaatgtctctgtcgtgaatgcggttgtcgccaacccggct
cagttcggctcagcgattgctgatggcgcagcctttgtggaccaagcggtactgggcaac
ctgtactacaacatccacacggctgacttcccgggcggtgaaatccgcggtcagttgctt
gttgatagcgatgagacggttggcaatatccgcaccatcgaactcagcggcggtctggat
gcaagccaggaacctggtccaacatccgacagcgaagccacgggcgacgcgacagtggtg
atcactcagaacctggaaacaggggaagtgacctactcaagcgagctgagcgttgttggc
ctcaacgaagctgaccttctgaccccgatcccgggtgttgtttcagccatccacctgcac
aatgcacctgccggtcaaaacggcccggttgtacaggacacattgttggatgccggtgca
actctggacgtcaatgccacaggtggcaccggcgtgatcggcgaagacgtgatcgacaac
cagatcgaagttgatgttctgtcctcaatcgaggcggtcattggcaccgacgatggtgac
gtgatcatcggagtggaagacgccccagttgtggctgacttctcggacctggacgttgca
gtgaccgtcagtgttgacgagaacggcaatggcaccgcaacccgcgacaccggcttcacc
gttgttgttgaggatgctgtgatcgacagccccggtcagtttggttcggcgatcgccaat
ggagcgcagtttgtggaacaagcggttgctggcaacctctactacaacatccacacagct
gacttcccgggtggtgaaatccgtggccaactgtctgtggttagcgatacaggccgagga
catgaccgtgtcatcgaacttgctgggtcgttggatgcaagccaggaacctggtccaaca
tccgatagcgaagccacaggtgaagcaacggtgacgatctcgttcgacgaggaaggcaat
gttctctactcaagcgagctgagtgttgttggcctcaacgaagctgaccttctgaccccg
atcccgggtgttgtttcagccatccacttgcacaatgcacctgccggtcaaaacggcccg
gttgtgcaggacacattggtggatgctggcgcaactctggacgtcaatgccacaggtggc
actggcgtgataggcgaagacgtgatcgacaaccagatcgaagtcatcgagcttatcggt
gttgatcaggtgatcggatcgggcgatgcagacacaatcgtactggaccagttcgatggt
gtaactgttgaccttgacctgagcggtcctgcgccaaacccggctgctgttggcggtgaa
ggcccacaagatggtgccatcatccaagacggtgaaatcctgatcgagttcgatgatttc
gaaaacgtgacgggttcggatggcaatgacctgatcctgggcaacaacgagatcaacgtt
ctcgaaggcggcgatggcaatgatgcgatccattccttcggaggcgcggatatcatcgac
ggcggcgagggcacagatacagcgctcttcacagctggtggcggtgttgttcttgatctc
gatgaagagggcaacggtgttgctactctgaacgctcctgaaggtgcgacgctcgacagc
gtgttcaactttgagaacatcaatggctcgaacaacgcaggcagcgccaacggtggtgcg
gacattctgtccggcaactccggtgcgaacactctgaacggccaagctggtgacgatgtt
ctcaacggtgaaggcggcgacgatgttctgatcggtggcgcaggtgcagacaccttcatc
ttcgaaggagcctttggcaacgacatcatccaggacttcgaagccggtgtcgactcgctt
cagtttggcgactttggttcggcctttggcctcagtgcaggcccaagcgtcagcgtcagc
caagacggggacgatgccctcatcagcttcggcgaccaaggttcggtgcgtctggcgggt
gtcagcagctccgatctgaacgacgacgacttcgtagcttaa
DBGET
integrated database retrieval system
