Roseovarius rhodophyticola: RZS32_011535
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Entry
RZS32_011535 CDS
T10617
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rrl Roseovarius rhodophyticola
Brite
KEGG Orthology (KO) [BR:
rrl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rrl03009
]
RZS32_011535 (rimO)
Enzymes [BR:
rrl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RZS32_011535 (rimO)
Ribosome biogenesis [BR:
rrl03009
]
Prokaryotic type
ribosomal protein modification factors
RZS32_011535 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WYK17054
LinkDB
All DBs
Position
complement(2276868..2278259)
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AA seq
463 aa
AA seq
DB search
MSPNPPNLRPDLAQPRVKPEQRSDQPVIGMVSLGCPKALVDSERILTRLRAEGYGISPDY
TGADAVIVNTCGFLDSAKAESLDAIGEALRENGRVIVTGCLGAEEDYITGAHPSVLAVTG
PHQYEQVLDAVHQAVPPKPNPFVDLLPETGVKLTPRHYSYLKISEGCNHKCKFCIIPDMR
GKLASRPGHAVLREATALVENGVRELLVISQDTSAYGLDRKYDVNSWNDVELRSHIVDLS
RELGKLGAWIRLHYVYPYPHVRELIPLMADPDNGLLPYLDIPFQHAHPDTLKRMARPAAG
AKTLDEIAAWRAICPEIAIRSTFIVGYPGETEEEFQTLLDWLQEAQLDRVGCFQYENVEG
ARANALPDHVPEEVMQDRWNRFMETAQAISVDKLAAKVGSRQDVIVDDIDEDGIATCRTK
ADAPEIDGCLFIDENTESLSVGDIATVEVDEAGDYDLWGRLIR
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccgaacccgcccaacctaagaccggatctggcgcagccgcgcgtcaagcctgag
cagcgcagcgatcagcctgtgatcggcatggtctcgctggggtgtccaaaagcgttggtg
gacagcgaacgcatcctgactcggctccgcgctgaaggttatggcatttcacccgactat
accggtgcggacgccgtgatcgtgaacacctgcgggtttctcgattccgccaaggccgaa
agcctggatgccatcggtgaggcactgcgcgaaaacgggcgtgtgatcgtaacaggctgt
ttgggcgccgaagaagactacatcaccggcgcgcatcccagcgttctggctgtgaccggt
ccgcaccagtacgaacaggttctggatgccgtgcatcaggccgttccaccaaaacccaac
ccgtttgtggacctgctgcccgaaaccggtgtcaaactgacaccgcggcactattcgtac
cttaagatttccgagggctgtaaccacaagtgcaagttctgcatcatccccgacatgcgc
ggcaagctggcctctcggcccggccacgccgtcctgcgcgaagccacggcgttggtcgaa
aacggcgtacgcgaacttttggtaatctcccaagatacaagtgcttacgggttggaccga
aagtatgacgtgaacagctggaacgatgtcgaactgcgcagtcacatcgtcgatctgtcc
agagaactcggcaagctcggtgcatggatccgcctgcactatgtctatccctacccgcat
gtgcgtgagttgatcccgctcatggccgaccctgacaatggcctcctgccctatctcgac
attccgtttcaacacgcccatcctgacacattgaaacgcatggcgcgtccggccgctggg
gccaaaacgctcgacgaaatcgcagcctggcgcgcgatttgtcctgagatcgccatccgc
tcgacctttatcgtgggataccccggtgaaaccgaggaagaattccagactcttctcgat
tggctgcaagaagcacagcttgatcgtgtcgggtgttttcaatatgaaaacgttgaaggc
gcgcgcgccaacgccttgccagatcatgtgcccgaagaggtcatgcaagaccgatggaac
cggtttatggaaacagctcaagccatttctgtggataaacttgctgcaaaggttggatca
cggcaagacgtcatcgtggacgatattgacgaggatggcatcgccacctgccgcacaaag
gccgacgccccagaaatcgacggctgtctcttcatagatgaaaataccgagagcctgtcg
gtcggagacattgccaccgtcgaggtggacgaggctggcgattacgatctttggggccgg
ttgatccgctga
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