Roseovarius rhodophyticola: RZS32_013980
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Entry
RZS32_013980 CDS
T10617
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rrl Roseovarius rhodophyticola
Pathway
rrl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rrl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RZS32_013980 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rrl03019
]
RZS32_013980 (groL)
03110 Chaperones and folding catalysts [BR:
rrl03110
]
RZS32_013980 (groL)
03029 Mitochondrial biogenesis [BR:
rrl03029
]
RZS32_013980 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rrl04147
]
RZS32_013980 (groL)
Enzymes [BR:
rrl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RZS32_013980 (groL)
Messenger RNA biogenesis [BR:
rrl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RZS32_013980 (groL)
Chaperones and folding catalysts [BR:
rrl03110
]
Heat shock proteins
HSP60 / Chaperonin
RZS32_013980 (groL)
Mitochondrial biogenesis [BR:
rrl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RZS32_013980 (groL)
Exosome [BR:
rrl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RZS32_013980 (groL)
Exosomal proteins of other body fluids (saliva and urine)
RZS32_013980 (groL)
Exosomal proteins of breast cancer cells
RZS32_013980 (groL)
Exosomal proteins of colorectal cancer cells
RZS32_013980 (groL)
Exosomal proteins of bladder cancer cells
RZS32_013980 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF7946
Motif
Other DBs
NCBI-ProteinID:
WYK17506
UniProt:
A0ABZ2TCS0
LinkDB
All DBs
Position
complement(2758741..2760375)
Genome browser
AA seq
544 aa
AA seq
DB search
MSAKDVKFGTDSRDRMLKGINTLANAVKVTLGPKGRNVVLDKSYGAPRITKDGVTVAKEI
ELSDAFENMGAQLVKDVASRTNDEAGDGTTTATVLAQAIVKEGMKSVAAGMNPMDLKRGI
DKAVTAVVAEVKAMSRPVGDTAEIAKVGTISANGESAIGQQIADAMAKVGNEGVITVEEN
KGLETETEVVEGMQFDRGYLSPYFITDAAKMTATLEDCVILLHEKKLTSLAPMVPLLEAV
MQANKTLLVMAEDIDGEALATLVVNKLRGGLKVAGVKAPGFGDRRKAMLEDLAVLTGGQV
ISEELGIKLENVTMDMLGDAKKITITKDTTTVIDGAGDKEAIASRVTQIRAQIEETNSDY
DKEKLQERLAKLAGGVAVIKVGGATEIEVKERKDRVDDALNATRAAVQEGVVPGGGVALV
HAGKVLEGLKGDNADQDAGIKIVRKALQAPLRQIAENAGVDGSVVAGKVLENTSKTFGYD
AQLDQYGDMLKAGVIDPTKVVRIALEYAASVAGLLVTTEAMVADKPAKPNRHDIPDMEGM
EGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaaagacgtcaaattcggcacggactcccgtgaccgcatgctcaagggcatt
aatacgctcgccaacgccgtcaaggtcacgcttggccccaagggccgcaacgtggttctc
gacaagtcctatggcgcgccgcgcatcactaaggacggcgttacggtcgccaaggaaatc
gaactttccgacgcgttcgaaaacatgggcgcacagctcgtcaaagatgttgcatcgcgc
accaatgacgaggctggcgacggcacaaccaccgcgacagttctggcgcaggccattgtc
aaggaaggtatgaagtcagtcgctgctggcatgaacccgatggacctcaaacgcggtatc
gacaaagcggtcaccgccgttgttgccgaggtcaaggcaatgtcacggcctgtgggcgat
acggccgagatcgccaaagtcggcaccatttcggcaaacggtgaatctgctatcggtcaa
cagatcgcggacgcgatggccaaggtcggcaacgaaggtgtcatcaccgtcgaagaaaac
aaagggctggagaccgagaccgaagtggtcgagggcatgcagttcgatcgcgggtatctc
agcccgtatttcattacagacgctgctaaaatgacggcgactctggaagactgcgttatc
ctccttcatgagaaaaaactgacatctctggcccccatggtgccgctgctcgaggctgtc
atgcaggcgaacaagacgcttttggtgatggccgaggatattgatggcgaagcgctcgca
acccttgtggtgaacaaactgcgcggtgggctgaaagtggccggtgtcaaagcgcccggt
tttggggatcgccgcaaagcgatgctggaagatcttgccgtcctgacgggcggacaagtg
atctccgaagaactgggcatcaagctcgaaaacgtcacgatggacatgcttggcgatgcc
aagaagattacaatcacgaaggacacaacaaccgtgatcgacggcgcaggcgacaaagaa
gctatcgcttcgcgtgtcactcaaatccgtgcacagatcgaagagaccaactcggactac
gacaaggaaaaattgcaggagcggctggccaaactggcgggcggtgttgcggtgatcaaa
gttggtggcgcgaccgagatcgaagtgaaagaacgcaaggatcgggttgatgacgccttg
aacgcaacacgtgcggccgtccaggaaggcgtcgtgccaggcggtggcgtcgcacttgtc
catgcaggcaaggttctggaaggactcaagggcgataacgcggatcaggatgcgggtatc
aagatcgtccgaaaagcccttcaggcaccgttgcgccagatcgcagaaaacgccggtgtc
gatggctcggtcgttgctggaaaagtacttgagaacaccagcaagacgttcggctatgat
gcgcagctggaccagtacggcgacatgttgaaggccggtgtcatcgatccgaccaaggtc
gttcggatcgcgcttgaatacgcggcatcggttgcaggcctgctcgttaccaccgaagcg
atggtggctgacaaacccgccaagccgaaccgccacgacatacccgacatggagggtatg
gaaggcatgatgtaa
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