Roseovarius rhodophyticola: RZS32_017060
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Entry
RZS32_017060 CDS
T10617
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rrl Roseovarius rhodophyticola
Brite
KEGG Orthology (KO) [BR:
rrl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrl03400
]
RZS32_017060
Enzymes [BR:
rrl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RZS32_017060
DNA repair and recombination proteins [BR:
rrl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RZS32_017060
Prokaryotic type
RZS32_017060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WYK18070
UniProt:
A0ABZ2TI41
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All DBs
Position
complement(3353328..3354752)
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AA seq
474 aa
AA seq
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MSDTSPTILWLRRDLRLADHPALLAAVKRSGPVIPVFIRDHSVDSLGAAPKWRLGLSLAQ
LAKRLDDMSSQLIFRSGEAMAVLEQLISETGATAVHWSRLYDPDAIARDTLIKGALKQRG
VEAESFAGHVLFEPWTVETKTGGFYRVYSPMWRAVRDRTVPEPQAAPSKLPAPETWPETE
TLDQWAMGAAMKRGAPVCLPHQRVGEEAARDRLDWFMANSIPPYKDDRNMPALDATSGMS
ENLTYGEISPRQCWHAGQRALDEGGGRGAEHWLKELVWREFAYHLVYHTPEILAGNWKSD
WDAFPWNEDEDHPEVAAWKQGRTGEPFVDAAMREMYVTGKMHNRARMIVASYLTKHLMTH
WKIGMRWFEDCLTDWDIAANAMGWQWTAGSGPDAAPYFRIFNPETQAEKFDPDGVYRRRW
IAEGHENPTKTALSYFDAVPKSWNLSASALYPERIVDLSGGRNRALQAYEARTF
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacgtcacccaccatcttgtggctgcgccgtgatttgcggctggctgatcat
cccgcgcttttagccgcggtcaaacgcagtggcccagtcatcccggtgttcattcgcgat
catagtgtggactctttgggagcggcgcccaaatggcggctgggtctgtccctggcgcag
ttggccaagcgcctagatgacatgagcagccagctcatttttcgcagtggcgaggccatg
gctgtgctggagcaactgatctctgagaccggtgcaacggccgtacattggtcgcggctt
tacgatccggatgctatcgcgcgcgatacattaatcaagggcgcgctcaagcagcgtggc
gtcgaggctgagagtttcgccggtcatgtcttgtttgaaccatggacggttgagaccaaa
accggcggattttaccgggtctattcaccgatgtggcgcgcagtacgcgacaggaccgtg
cccgagcctcaggccgcgccgtcaaaactccctgcgccggaaacctggcctgaaacggaa
accttggatcaatgggcaatgggggccgcgatgaagcgcggagcgcccgtgtgtctgcca
catcaacgggttggggaagaggccgcacgcgaccggctggactggttcatggccaattcg
atcccgccctacaaagatgaccgcaacatgcctgctcttgatgcgacatcgggcatgtcc
gaaaatctcacctatggcgagatttctccgcgccagtgctggcatgcaggacagcgtgcc
ttggacgaaggcggaggacgaggggcagaacattggctcaaggaactcgtgtggcgcgag
tttgcctaccatctggtctatcacacacccgaaatccttgcaggcaactggaaatcggat
tgggatgcatttccctggaacgaggatgaggatcatcccgaggtcgctgcctggaaacag
ggacgcacaggagagcctttcgtcgatgccgccatgcgtgagatgtatgtgaccggcaag
atgcacaatcgtgcccggatgattgtcgcaagttacctcaccaagcatctgatgacacat
tggaaaatcggaatgcgctggtttgaggattgcctgaccgactgggacattgccgccaat
gcgatgggctggcagtggacggcaggaagcggaccggacgccgcaccgtactttcgaatc
ttcaaccccgaaacacaggccgagaagtttgatcctgacggcgtctaccgccgtcgttgg
atcgccgaaggtcacgaaaaccccaccaaaaccgcgctgagctacttcgacgccgttccc
aaaagctggaacttgtcggcctcggcgctttacccagaacgcatcgtcgatctaagcggc
ggacgcaaccgcgcgctacaagcatatgaggccagaacgttttga
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