Roseovarius rhodophyticola: RZS32_018000
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Entry
RZS32_018000 CDS
T10617
Symbol
lptF
Name
(GenBank) LPS export ABC transporter permease LptF
KO
K07091
lipopolysaccharide export system permease protein
Organism
rrl Roseovarius rhodophyticola
Pathway
rrl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rrl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RZS32_018000 (lptF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rrl02000
]
RZS32_018000 (lptF)
Transporters [BR:
rrl02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
RZS32_018000 (lptF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
WYK20095
LinkDB
All DBs
Position
3536804..3537940
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AA seq
378 aa
AA seq
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MLSQFMVLFGFFALILVSIFWINKAVRMFDRLIGDGQPAWVFLEFTALTLPGVIGVVLPI
AAFAGTVYVTNRMTTESELTVVQATGYSPWRLIRPVLIYGIFIALMMSVLSHYLIPKSLG
QLKLRQTEVSQNITAKLLTEGEFLHPAPGITFYIREITPEGELQDVFLSDRRNEENPVTY
TSTQAYLVQEGGGTKLVMVDGLAQNLRGDGNRLFTTHFDDFSYDISTLITRDPTNLNRVT
FTLTSDLLFQPDVVAAATGATEPQILYEAHGRFAQALMCIVAALIGFAMLLVGTYSRFGV
WWQIVAAFTLLIFIKLIEGGVSGAVLARASAWPLMYLPAATGALLTVILLYLAARPGMLR
RIWRGRHNTSPPSAEGAA
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgcaattcatggtgctctttgggttctttgcccttatccttgtgtcgatcttc
tggatcaacaaggcagtgcgtatgtttgaccgtctcatcggcgacggccagcctgcttgg
gtattcctggaattcaccgctctgaccctgcccggcgtgatcggtgttgtcctgcccatc
gcggcttttgctgggacggtttatgtcaccaaccggatgaccacggaaagtgaactgacg
gtcgtacaggcgacgggctattcgccttggcggctcattcgtccggttctgatctatggg
attttcatcgcgttgatgatgtcggtcctgagccactatcttattcccaaaagcctgggc
caactgaaacttcgtcagactgaggtgagtcaaaacatcaccgccaagcttctgaccgaa
ggcgaatttctgcaccctgcgccaggcatcacattctatattcgtgaaatcacccctgaa
ggtgaacttcaagacgtcttcctgtcagatcgccgaaacgaggaaaacccggtcacatat
acctctacccaagcctaccttgttcaagagggcggcggcacgaaactcgtgatggtcgac
ggcttggcgcagaatttgcgcggcgacggaaaccgcctcttcaccacacattttgacgat
ttttcttacgacatcagcacgctgatcacccgggatccaacgaatcttaatcgtgtgacc
tttacgctcaccagtgacctgctgtttcaaccagatgtggttgctgctgcaacaggtgcg
acagagccgcagattctctacgaggcgcatggccggttcgcacaggctctgatgtgtatt
gtggctgccctgataggctttgccatgttgctggtcggcacttacagccgttttggcgtc
tggtggcagatcgttgcagccttcactctattgatctttatcaagctcattgaaggcggc
gtcagcggtgcggttttggcccgggccagcgcgtggcctttgatgtatctgccagccgct
acaggtgcgttgctgaccgttattcttctctatcttgcagcacggcctggtatgctgcgc
cggatttggcgaggacggcacaataccagtcccccctctgcggagggtgcggcatga
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