Roseovarius rhodophyticola: RZS32_018410
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Entry
RZS32_018410 CDS
T10617
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
rrl Roseovarius rhodophyticola
Brite
KEGG Orthology (KO) [BR:
rrl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rrl03400
]
RZS32_018410
DNA repair and recombination proteins [BR:
rrl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RZS32_018410
Archaeal homologous recombinant proteins
RZS32_018410
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
XFP_C
AAA_21
Motif
Other DBs
NCBI-ProteinID:
WYK20171
UniProt:
A0ABZ2TKQ5
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All DBs
Position
unnamed1:5104..8163
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AA seq
1019 aa
AA seq
DB search
MRPIRITMTAFGPYAGTEVVDFTAALDAGIFGIYGETGAGKTTIFDSISFALFGQSSGAE
RSAEDMVCHHAHATDITKVELVFDLGNERYVVQRVPKQQRAALRGQGTTTEPHQACLFRA
TGMSLDEIAGDNLGEVLAEKQVNKVDPEIEALLGYNAAQFRQIVLLPQGDFRKILTAPSD
ERSPILKRLFDVQLYERFADRIKRDAADIYRQISDERVRRDTHLGALSEEQLADELRSMG
EEVSVLETAVKAETDALVQCQKVLSAGEGLAEKFEARGAAETEKATLDAASEAVEETRSR
LKKARAAQTVLVAESAMRTAGEEAGAAQTRHATAKESLASAQSALSVAQEALNRTEQQKD
SRDAAHARVLELQRFEQTLGQSRTLLEDLEAAKSTTKAAAEKQAVAERNRTDADQTLATL
RSLQKQQPTHVRALQEAGNAFTTVEREVEALGRFEVAKSKCNARVADVERQQAEHEKWRA
HLEVCKTALERAEHDLTEIQALHVARTLLPGEPCPACGSLDHPNPAIGDPERRGRHDQFE
QATRDLRAAERDEVQAKTRLTAAKSSLAEHQTELEAFEPPVRDRKSLDLVLAEALDRKTA
LEADTRFVDLEDKIATAEVSTQEAVSNYERARQVLSEARDAETRAQTSYDTLLRDVPENW
RQGDVLATALSDAVTARSELVAAHERAVNGEKAAAVALSAAEQGAASAVVEIERTAEALS
KTQAEFTQRLAVVGLDEAGFQVARADVAQCDSLQEQIDSFNERAAANKAHLERLAKEIGD
QDPPDIETLIASRDAAQSKLETSQQTQTRLKRDQEAKLETQRKVEAHSARITELEAEYGP
VGGLADLVNGNNDRKVRLPDFAIASMFDEVLVAANQRLGPMTGGRYQLLRPEDTVGGRQK
RGLDIAVFDANTEKSRPTKTLSGGEGFQASLALALGLSDVVQQNSGGIKLDAIFIDEGFG
TLDEDTLNTALETLYELTNDKRSVGLISHTEQVKSMITEGFDIEVTPSGSHIHTRRSAV
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgatccggattacgatgactgcgtttggcccttacgccgggaccgaagtagtc
gattttacggcggcgctcgatgccggaatctttgggatttacggagaaaccggtgccgga
aaaaccacgatcttcgacagtatctctttcgccttgtttggacagtcctccggggcagag
cgcagcgcagaggatatggtttgccatcacgcccatgcaaccgacatcacgaaggtcgaa
ctcgttttcgatctcggcaacgaacggtatgttgttcaacgcgttcccaagcagcagcgc
gcggcgcttcgtgggcagggcacaacgaccgaaccgcaccaggcgtgccttttccgggcg
accggcatgtcactggacgaaatcgcaggcgacaatctcggtgaggtcctggctgagaaa
caggtcaacaaggtcgatcctgagatagaggcgcttctgggctacaatgctgcccagttc
cgtcagatcgttctgttgcctcagggtgacttccgcaaaatcctgacggcgccaagcgat
gagcgctccccgatcctgaagcgcctgtttgacgtccagctctacgaacgctttgcggat
cgcatcaaacgcgatgccgccgacatttaccgtcaaatcagtgatgaacgcgtccggcgc
gacacgcatctgggtgctctgagcgaagaacaactggccgacgagcttcgttcgatgggc
gaagaggtctccgtactcgagactgccgtgaaagcagagaccgatgcgctggtgcaatgt
cagaaggttttgtctgctggagagggtctggcagaaaagttcgaagcgaggggagcggct
gagacagagaaagcaacgctcgatgctgcaagtgaggcggttgaagaaaccaggtcccgt
ctaaaaaaggcgcgtgcggcacaaactgtattggtcgccgagtctgcgatgcggaccgcg
ggcgaggaggccggtgccgctcagacccgtcacgccacggctaaggaaagtttggcttct
gctcaatcggccctgagcgtggcccaagaagcgctcaatcggacggagcagcagaaggat
agtcgcgacgctgcccatgcaagagtgctagaactgcaacgcttcgaacaaacgctcggc
caatcccgcaccctgttggaggaccttgaggcggcgaaatctacaacgaaggcagcggct
gagaagcaggctgtcgcagaacgcaatcggacggacgccgatcaaacacttgcgacgctc
cgcagcctgcagaaacagcagccgacgcacgtgcgagcccttcaggaagcaggcaatgcg
ttcacaacggtggaacgtgaagtagaggccttgggtcgttttgaagtcgcgaagtccaaa
tgtaatgcgcgggtagctgatgttgagaggcagcaagccgagcacgaaaagtggagagcc
catctcgaagtctgcaagaccgccctggaacgcgcggagcatgatttgaccgagatacag
gcgctccacgtggcgcgaacacttcttccgggagagccctgtccggcatgtggctcgttg
gaccatcccaatccggcgatcggcgatccggagcgccggggtcgtcatgaccagttcgag
caggcgacgcgggatctgcgcgccgccgaacgtgatgaggtccaagcgaagactagactt
accgctgcgaagtcctccctggccgaacatcagaccgaacttgaagcattcgagcctcca
gttcgggatcgaaagagcctcgatctggttctggcagaagcgctggacaggaagaccgca
ctggaagcagatacccgatttgtcgatctcgaagacaagatcgccactgcagaagtctcc
acgcaggaggcggtttccaactacgagcgggcacgtcaagtcctgtcggaggccagagac
gcggagacacgggcacagacgtcctacgacaccctactgcgagacgtgcctgagaactgg
cggcaaggagatgtcttggcgaccgcactatcggatgccgtaaccgcacggagtgaactc
gttgccgctcacgagagagccgtaaatggagaaaaggcggccgctgtcgcccttagtgcc
gccgagcaaggggctgcgagtgctgtcgtagagatcgaacgaacagccgaggccctatcc
aagactcaggcggagttcacacagaggcttgcagtggtcgggttggacgaagcaggtttt
caagttgcaagagctgacgtggcgcagtgcgattcgctccaagaacagatcgactctttc
aatgagcgcgcggctgccaacaaggcccaccttgagcggctggcgaaggaaatcggcgac
caagaccccccggacatcgaaacgctaatagcctcgagagatgccgcccaatcgaagctg
gaaaccagccagcagacccaaacccgtctgaaacgggaccaggaagcaaagctcgagaca
caacgtaaggtcgaagcgcattctgctcgtatcactgaactggaggcggagtacggtccg
gtcggcggcctcgcagacctggtcaacggcaacaatgaccgcaaggtccggctcccggat
ttcgcgatcgcctcgatgttcgatgaggtgctcgtcgcggccaaccaaaggctcgggccc
atgacgggcgggcgctatcagcttttgcgtcctgaagataccgtaggggggcgacaaaag
cgcgggctggacattgccgtcttcgatgccaacacggagaagtcgcgacccacaaagacg
ctatccggcggcgagggattccaagcctcgcttgcccttgccctcggtctctccgatgtc
gttcagcagaacagtggtgggatcaagctcgatgcgattttcattgatgagggcttcggc
actctggacgaagacaccctgaatacggcgcttgagacgctttacgaactgaccaacgac
aagcggtcggtggggctgatctcccataccgagcaggtgaaatccatgatcaccgaaggg
tttgacatcgaagtcacgccttctgggtcccacatccatacgcggagatccgcagtataa
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