Rickettsia rickettsii Morgan: RRM_03550
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Entry
RRM_03550 CDS
T03662
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rrm
Rickettsia rickettsii Morgan
Pathway
rrm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rrm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RRM_03550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rrm03019
]
RRM_03550
03016 Transfer RNA biogenesis [BR:
rrm03016
]
RRM_03550
Enzymes [BR:
rrm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RRM_03550
Messenger RNA biogenesis [BR:
rrm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RRM_03550
Transfer RNA biogenesis [BR:
rrm03016
]
Prokaryotic type
tRNA degradation factors
RRM_03550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_DUF2096_C
S1_RRP5
KH_2
CSD
Motif
Other DBs
NCBI-ProteinID:
AJG34435
LinkDB
All DBs
Position
complement(648047..650293)
Genome browser
AA seq
748 aa
AA seq
DB search
MFNEITKSVTWNGQVLELSTGKIARQADGAVTVKMGNSVLLCTAVVANKAKEGIGFLPLT
INYREMAYAAGKIPGGFFKHEGKPSDREVLVSRLIDRPIRPLFHPAFVNETHVTCSVLSY
DPETPVDILAIIGASAALSLSPAPYLEIVAASKVGLINGEFVLNPTLALLKTSQLDLVVA
GTSDSVMMVESEAHLLSEEQMLEAVKFGFESFQPVIKIIKELAEEAKKPKLEMQALYPAS
LKKEIEKLFVKEIEQAFAMKSKQERSTNLDLITEKVFTHFVSDIENKKYSHYQIESALKA
IESGILRNEILEKNRRIDGRSTTDIRQIACEIGLLPSAHGSALFTRGETQSLVSTTFGTS
LDEQIVDSLEGEYKERFMLNYIFPPYSVNEAMPMKAPSRREVGHGKLAWRAINPILPNKV
QFPYSIRVVAETTESNGSSSMATVCGSSLALMYAGVPIKAPVAGIAMGLVKEGKNFAVLS
DILGDEDYFGDMDFKVAGTGEGITALQMDIKISGVDFKIMKVALEQARLGRLHILEQMNK
VISKPNNELSKNAPSTTTIKIDKDKIRDIIGPGGKVIKEICETSGAKIDISDDGTVSVYA
SDRDKLKVALDKIKAIVVEPEIGEIFNGTVVKVLDSGAFINYVGNKDGFVHISEVSGERI
ETVSSVLKQGDIVKVKLIGFDNKGKAKLTIKNADKDKFSNNTKPKTSVNNTKDNSEPEQR
HDSSKKRAWNEDNNAEIAEVITERKYFN
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacgaaataactaagagtgttacatggaacgggcaagttcttgagcttagtaca
ggtaaaatagcaaggcaagctgacggggcagttacggtaaaaatgggtaattccgtttta
ttatgtacggcagtagtagctaacaaagcaaaagagggcataggttttcttcctttaaca
attaattatagagaaatggcatatgctgccggtaagataccagggggattttttaaacat
gagggaaaaccatcagatagagaagttttagtatctcgtttaatagatagaccgattaga
ccattatttcatccggcttttgtgaatgaaacgcatgtcacttgcagtgttctttcatat
gatcctgaaactccggtagatatacttgcaattatcggtgcatcggctgcacttagccta
tcccctgctccttatctagaaatagttgcggcaagtaaagtaggtttaatcaatggtgaa
tttgttttaaatccgacacttgcattattaaaaacaagtcagcttgatttagtagttgca
ggaacatcagattcagtaatgatggttgaatcagaagctcatttactttctgaagaacaa
atgttagaagctgtaaaatttggatttgaaagctttcagccggtaataaagataattaaa
gaactagcagaagaagctaaaaaaccaaaacttgaaatgcaagctttatatcctgcttca
ttaaagaaagaaattgagaagttatttgtaaaagaaattgaacaagcttttgcaatgaaa
tctaaacaagaacgtagcactaatttagatttaataactgaaaaagtttttacacatttt
gtaagcgacatagaaaataaaaaatatagtcattatcaaatcgaatcagctttaaaagct
attgaatcaggtatattacgtaacgagattttagaaaaaaatagacgtatcgatggaaga
agtaccacggatataagacaaattgcttgtgaaataggtttactaccttccgcacatggt
tcagctttatttactagaggtgaaacgcaaagcttagttagtactacattcggtactagt
ttagatgagcagatagttgacagtttagagggtgagtataaagagcgttttatgctcaat
tatatctttccgccctactctgtaaatgaagcaatgccaatgaaagcacctagtcgtcgt
gaagtcggacacggtaaactcgcatggcgtgctattaatccaatattacctaataaagta
caatttccttattctattagagtagttgccgaaactacggaatctaacggttcttcttca
atggcaactgtttgcggtagttctcttgctttaatgtatgccggcgtaccgataaaagca
ccggttgcgggtattgctatgggacttgttaaggaaggtaaaaattttgccgtattatcg
gatattctcggcgatgaagattatttcggtgatatggactttaaggttgcaggaactggc
gaagggattactgcattacaaatggatatcaaaatatccggagtagattttaaaataatg
aaagtagctttagagcaagcacgactcggtcgtttacatatactggagcaaatgaataaa
gttatcagtaaaccaaataacgaactaagtaaaaatgctccttctactactactataaaa
atagataaggataaaattagagatattataggaccgggaggtaaagtaataaaggaaatt
tgtgaaactagcggtgctaaaatagatataagcgatgacggtacggtgtctgtttatgct
tcagatagagataagctaaaagttgccttagataaaattaaagctattgtcgttgaacct
gaaatcggtgaaatatttaacggtacggtagtgaaagtcttagattccggtgcttttatt
aattatgtaggtaataaagacggctttgttcatattagtgaagtatcaggagaaagaata
gaaacggttagcagtgttttaaaacaaggcgatatagtaaaagttaagctaataggcttt
gataataaaggcaaagcaaaattaactattaaaaatgccgataaagataaattttcaaat
aatacaaagccaaaaactagtgttaataatactaaggacaattcagaacctgagcagcga
catgattctagtaaaaaacgcgcttggaatgaagataataatgctgaaattgctgaagta
attacagaacgtaagtattttaattga
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