Rickettsia rickettsii Hino: RPJ_03235
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Entry
RPJ_03235 CDS
T01738
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rrn
Rickettsia rickettsii Hino
Pathway
rrn00300
Lysine biosynthesis
rrn00470
D-Amino acid metabolism
rrn01100
Metabolic pathways
rrn01110
Biosynthesis of secondary metabolites
rrn01120
Microbial metabolism in diverse environments
rrn01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rrn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RPJ_03235 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RPJ_03235 (dapF)
Enzymes [BR:
rrn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RPJ_03235 (dapF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Fer2
S_layer_C
Motif
Other DBs
NCBI-ProteinID:
AFB27565
LinkDB
All DBs
Position
569388..570200
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AA seq
270 aa
AA seq
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MISKINFVKMHGLGNDFVIVNKRDLSSSYDLSQLAKNMAERHTGIGCDQFILYEEHNDFY
EMIIYNIDGSSAKLCGNATRCLAKLIYLDTGKQDITVMVGNKKLLCNVNDENNISVNVGS
VSFNEAWMPSRDKVWEFAERYMIDLKETICVDIGNPHVVIFSKLEPQDQKIVGERLQAKE
LFADGVNVNFAEVKDNKIYLSVWERGVGLTLACGSGACGSFAAGLKHGFIHSPSTIVFKH
GNLTMKEENGNIIMQGAATLVARGEYYCEQ
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgattagtaaaattaattttgtaaaaatgcatggtctcggtaatgattttgttattgtt
aacaaacgagatttatcaagttcatatgatttatcgcagttagcaaaaaatatggctgag
cgtcatacaggtatcggttgcgatcagtttattctttatgaagagcataatgatttttat
gaaatgattatatataacatagacggctctagtgctaaattatgcggtaatgctacaaga
tgtttagccaagttaatttatcttgatacgggaaagcaggatattaccgtaatggtaggc
aataaaaaattgctatgtaatgtcaatgatgaaaataatattagcgttaatgtaggaagc
gtgagttttaatgaagcttggatgccaagtcgtgataaagtttgggaatttgcagagcgt
tatatgattgatttaaaggaaactatttgcgttgatataggtaatccgcatgtagttatt
tttagtaagttagaacctcaagatcaaaaaattgttggtgaaagattgcaggctaaggaa
ttattcgcagatggggtaaacgttaattttgctgaagtaaaagataataaaatctattta
tccgtttgggagcggggggtagggttaacgcttgcttgcggaagcggagcttgtggtagt
tttgctgccggtttaaagcacggttttatccattcaccaagtactatagtctttaagcac
ggtaaccttactatgaaagaagaaaacggtaatataataatgcaaggggcagctacgctt
gtagcacgtggggaatattattgtgagcaataa
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