Rickettsia rickettsii Hino: RPJ_06170
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Entry
RPJ_06170 CDS
T01738
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rrn
Rickettsia rickettsii Hino
Pathway
rrn03030
DNA replication
rrn03430
Mismatch repair
rrn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rrn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RPJ_06170
03430 Mismatch repair
RPJ_06170
03440 Homologous recombination
RPJ_06170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rrn03032
]
RPJ_06170
03400 DNA repair and recombination proteins [BR:
rrn03400
]
RPJ_06170
Enzymes [BR:
rrn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RPJ_06170
DNA replication proteins [BR:
rrn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RPJ_06170
DNA repair and recombination proteins [BR:
rrn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RPJ_06170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AFB28059
LinkDB
All DBs
Position
1040539..1041228
Genome browser
AA seq
229 aa
AA seq
DB search
MSSLREIILDTETTGLDPQQGHRIVEIGAIEMVNKVLTGRNFHFYINPERDMPFEAYRIH
GISGEFLKDKPLFHTIADDFLEFISDSKLIIHNAPFDIKFLNHELSLLKRTDIKLLELAN
TIDTLVMARSIFPGSKYNLDALCKRFKVDNSGRQLHGALKDAALLAEVYVELMGGRQSAF
KMVDKSAVINNLATNQVNNKTEQTTIVIKPTKEELQKHKEFLSRILKTA
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttaagagaaataattttagataccgagactacgggacttgacccacaacaa
ggtcatcgaatcgttgagatcggtgctattgagatggtaaataaggtattaacaggcagg
aattttcatttttatattaatcccgagcgagatatgccgtttgaggcttatagaattcat
ggcatatccggcgaatttttaaaagacaagcctctatttcatacaatagccgatgatttt
ttagagtttatttcagatagcaaactgattattcataatgctcctttcgatattaaattt
ctaaatcatgaattatcattattaaaaagaaccgacattaaactcttggaactagcaaat
actattgatactttagtaatggctagaagcatatttccaggctcaaaatataatcttgat
gcattatgtaaaagatttaaagttgataattcaggtaggcagcttcacggagctttgaaa
gatgccgcattacttgcagaagtatatgtagagttaatgggcggtagacaatccgctttt
aaaatggttgataaatctgccgtaataaataatttagcaactaatcaagtaaataacaaa
acagaacaaactactattgttattaaacctacaaaagaagagctgcaaaaacataaagag
tttctcagtaggattttaaaaactgcttag
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