KEGG   PATHWAY: rro03022
Entry
rro03022                    Pathway                                
Name
Basal transcription factors - Rhinopithecus roxellana (golden snub-nosed monkey)
Class
Genetic Information Processing; Transcription
Pathway map
rro03022  Basal transcription factors
rro03022

Other DBs
GO: 0005668 0005669 0005672 0005673 0005674 0005675
Organism
Rhinopithecus roxellana (golden snub-nosed monkey) [GN:rro]
Gene
104663331  GTF2A1; transcription initiation factor IIA subunit 1 isoform X1 [KO:K03122]
104668944  GTF2A1L; TFIIA-alpha and beta-like factor isoform X1 [KO:K03122]
104670880  GTF2A2; transcription initiation factor IIA subunit 2 [KO:K03123]
104660431  GTF2B; transcription initiation factor IIB [KO:K03124]
104674401  TBP; TATA-box-binding protein [KO:K03120]
104669139  TBPL2; TATA box-binding protein-like protein 2 [KO:K03120]
104678239  TBPL1; TATA box-binding protein-like protein 1 [KO:K03120]
104657094  TAF1; LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 1 [KO:K03125] [EC:2.3.1.48 2.7.11.1]
104657918  TAF2; transcription initiation factor TFIID subunit 2 isoform X2 [KO:K03128]
104659578  TAF7L; transcription initiation factor TFIID subunit 7-like isoform X1 [KO:K03132]
104681802  TAF7; transcription initiation factor TFIID subunit 7 [KO:K03132]
104667311  TAF8; transcription initiation factor TFIID subunit 8 isoform X3 [KO:K14649]
104682666  TAF3; transcription initiation factor TFIID subunit 3 isoform X1 [KO:K14650]
104678309  TAF10; transcription initiation factor TFIID subunit 10 isoform X1 [KO:K03134]
104670696  TAF5L; TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1 [KO:K03130]
104656539  TAF5; transcription initiation factor TFIID subunit 5 isoform X1 [KO:K03130]
104676059  TAF4B; transcription initiation factor TFIID subunit 4B isoform X2 [KO:K03129]
104663886  TAF4; transcription initiation factor TFIID subunit 4 isoform X1 [KO:K03129]
104675697  TAF12; transcription initiation factor TFIID subunit 12 isoform X1 [KO:K03126]
104673594  TAF6; transcription initiation factor TFIID subunit 6 [KO:K03131]
104679333  TAF6L; TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L [KO:K03131]
104674542  transcription initiation factor TFIID subunit 9-like [KO:K14535]
104675633  TAF9; transcription initiation factor TFIID subunit 9 [KO:K14535]
104682772  TAF9B; transcription initiation factor TFIID subunit 9B isoform X2 [KO:K03133]
104682844  TAF11; transcription initiation factor TFIID subunit 11 isoform X1 [KO:K03135]
104656654  putative TAF11-like protein ENSP00000332601 [KO:K03135]
104656655  putative TAF11-like protein ENSP00000332601 [KO:K03135]
104668224  transcription initiation factor TFIID subunit 11-like [KO:K03135]
104655794  transcription initiation factor TFIID subunit 13 [KO:K03127]
104669754  transcription initiation factor TFIID subunit 13 [KO:K03127]
104679575  TAF15; TATA-binding protein-associated factor 2N isoform X1 [KO:K14651]
104680976  GTF2E1; general transcription factor IIE subunit 1 [KO:K03136]
104668227  GTF2E2; transcription initiation factor IIE subunit beta [KO:K03137]
104665372  GTF2F1; general transcription factor IIF subunit 1 [KO:K03138]
104666059  GTF2F2; general transcription factor IIF subunit 2 [KO:K03139] [EC:5.6.2.-]
104667646  GTF2H1; general transcription factor IIH subunit 1 [KO:K03141]
104675637  GTF2H2; general transcription factor IIH subunit 2 [KO:K03142]
104666327  GTF2H3; general transcription factor IIH subunit 3 isoform X1 [KO:K03143]
104666205  GTF2H4; general transcription factor IIH subunit 4 isoform X2 [KO:K03144]
104662432  ERCC3; general transcription and DNA repair factor IIH helicase subunit XPB [KO:K10843] [EC:5.6.2.4]
104673446  ERCC2; general transcription and DNA repair factor IIH helicase subunit XPD isoform X1 [KO:K10844] [EC:5.6.2.3]
104676660  GTF2H5; general transcription factor IIH subunit 5 [KO:K10845]
104675629  CDK7; cyclin-dependent kinase 7 isoform X1 [KO:K02202] [EC:2.7.11.22 2.7.11.23]
104655233  MNAT1; CDK-activating kinase assembly factor MAT1 [KO:K10842]
104655277  CCNH; cyclin-H isoform X1 [KO:K06634]
104677756  general transcription factor II-I-like [KO:K03121]
104681250  GTF2I; general transcription factor II-I isoform X1 [KO:K03121]
Reference
PMID:16858867
  Authors
Thomas MC, Chiang CM
  Title
The general transcription machinery and general cofactors.
  Journal
Crit Rev Biochem Mol Biol 41:105-78 (2006)
DOI:10.1080/10409230600648736
Reference
PMID:12516863
  Authors
Martinez E
  Title
Multi-protein complexes in eukaryotic gene transcription.
  Journal
Plant Mol Biol 50:925-47 (2002)
DOI:10.1023/A:1021258713850
Reference
PMID:19308322
  Authors
Cler E, Papai G, Schultz P, Davidson I
  Title
Recent advances in understanding the structure and function of general transcription factor TFIID.
  Journal
Cell Mol Life Sci 66:2123-34 (2009)
DOI:10.1007/s00018-009-0009-3
Reference
PMID:10838567
  Authors
Malik S, Roeder RG.
  Title
Transcriptional regulation through Mediator-like coactivators in yeast and metazoan cells.
  Journal
Trends Biochem Sci 25:277-283 (2000)
DOI:10.1016/S0968-0004(00)01596-6
Related
pathway
rro03020  RNA polymerase
rro03420  Nucleotide excision repair
KO pathway
ko03022   
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