Rhinopithecus roxellana (golden snub-nosed monkey): 104654060
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Entry
104654060 CDS
T03989
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X4
KO
K17890
autophagy-related protein 16-1
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro04136
Autophagy - other
rro04140
Autophagy - animal
rro04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104654060 (ATG16L1)
04136 Autophagy - other
104654060 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
104654060 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rro04131
]
104654060 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
rro03029
]
104654060 (ATG16L1)
Membrane trafficking [BR:
rro04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
104654060 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
104654060 (ATG16L1)
Mitochondrial biogenesis [BR:
rro03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
104654060 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
ATG16
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_EIPR1
WD40_RFWD3
eIF2A
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_HPS5
Beta-prop_ACSF4
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Tricorn_2nd
Beta-prop_VPS8
Beta-prop_NWD2_C
TolB_like
Motif
Other DBs
NCBI-GeneID:
104654060
NCBI-ProteinID:
XP_010351441
UniProt:
A0A2K6NRV1
LinkDB
All DBs
Position
14:complement(65424518..65469335)
Genome browser
AA seq
624 aa
AA seq
DB search
MSSGLRSADFPRWKRHISEELRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEK
HDVPNRHEISPGHDGTWNDSQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQQK
DREMQMNEAKIAECLQTISDLETECLELRTKLCDLERANQTLKDEYDALQITFTALEEKL
RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
EVIVDETSDHTEETSPVRAISRAATKRLSQPAGGLLDSITNIFGLSESPLLGHHSSSDAA
RRRSVSSFPVPQDNVDTHPGSGKEVRVPTTALCVFDAHDGEVNAVQFSPGSRLLATGGMD
RRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHT
LTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVM
SGHFDKKIRFWDIRSESIVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAVK
QTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAV
AWSPSGSHVVSVDKGCKAVLWAQY
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgggcctccgctccgctgacttcccccgttggaagcggcacatctcggaggaa
ctgaggcgccgggaccggctgcagagacaggcgttcgaggagatcatcctgcagtataac
aaattgctggaaaagtcagatcttcattcagtgttggcccagaaactacaggctgaaaaa
catgacgtaccaaacaggcatgagataagtcccggacatgatggcacatggaatgacagt
cagctacaagaaatggcccagctgaggatcaagcaccaagaagaactgactgaattacac
aagaaacgtggggagttagctcaattggtgattgacctgaataaccaaatgcagcagaag
gacagggagatgcagatgaatgaagcaaagattgcagaatgtttgcagactatctctgac
ctggagacggagtgcctagaactgcgcactaagctttgtgaccttgaaagagccaaccag
accctgaaggatgaatatgatgccctgcagatcacttttactgccttggaggaaaaactg
aggaaaactacggaagagaaccaggagctggtcaccaggtggatggctgagaaagcccag
gaggccaatcggctcaatgcagagaatgaaaaagactccaggaggcggcaagcccggcta
cagaaagagcttgcagaagcagcgaaggaacctctaccagtcgaacaggatgatgacatt
gaggtcattgtggatgaaacctctgatcacacagaagagacgtctcctgtgcgagccatc
agcagagcagccactaagcgactctcgcagcctgctggaggccttctggattctatcact
aatatctttggtctgtccgagtctccccttttgggacatcattcttcttctgatgctgcc
aggagacgctctgtctcttccttcccagtcccccaggacaatgtggatactcatcctggt
tctggtaaagaagtgagggtaccaactacggccttgtgtgtcttcgatgcacatgatggg
gaagtcaacgctgtgcagttcagtccaggttcccggttactggccaccggaggcatggat
cgcagggttaagctttgggaagtatttggagaaaaatgtgagttcaagggttccctatct
ggcagtaatgcaggaattacaagcattgaatttgatagtgctggttcttacctcttagca
gcttcaaatgattttgcaagccgaatctggactgtggatgattatcggttacggcacaca
ctcacgggacatagtgggaaagtgctgtctgctaagttcctgctggacaatgcgcggatc
gtctcaggaagtcacgaccggactctcaaactctgggatctacgcagcaaagtctgcata
aagacagtgtttgcaggatccagttgcaatgatattgtctgcacagagcaatgtgtaatg
agtggacattttgacaagaaaattcgtttctgggacattcgatcagagagtatagttcga
gagatggagctgttgggaaagattactgccctggacttaaacccagaaaggactgagctc
ctgagctgctcccgggatgacttgctaaaagttattgatctccgaacaaatgctgtcaag
cagacattcagtgcacctgggttcaagtgcggctctgactggaccagagttgtcttcagt
cctgacggcagttacgtggcggcaggctctgctgagggctctctctatatctggagtgtg
ctcacggggaaagtggaaaaggttctttcaaagcagcacagctcatccatcaatgcagtg
gcgtggtcgccctctggctcgcacgttgtcagcgtggacaaaggatgcaaagctgtgctg
tgggcacagtattaa
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