Rhinopithecus roxellana (golden snub-nosed monkey): 104654873
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Entry
104654873 CDS
T03989
Symbol
PABPC4
Name
(RefSeq) polyadenylate-binding protein 4 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro03015
mRNA surveillance pathway
rro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104654873 (PABPC4)
09123 Folding, sorting and degradation
03018 RNA degradation
104654873 (PABPC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rro03019
]
104654873 (PABPC4)
03041 Spliceosome [BR:
rro03041
]
104654873 (PABPC4)
Messenger RNA biogenesis [BR:
rro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104654873 (PABPC4)
mRNA cycle factors
Stress granule specific factors
104654873 (PABPC4)
Spliceosome [BR:
rro03041
]
Complex C
Other components
Complex C specific factors
104654873 (PABPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
PABP
RRM_5
RRM_7
RRM_occluded
RRM_3
ApbA_C
Motif
Other DBs
NCBI-GeneID:
104654873
NCBI-ProteinID:
XP_010352486
UniProt:
A0A2K6PQ38
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All DBs
Position
12:complement(90634937..90651881)
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AA seq
660 aa
AA seq
DB search
MNAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEK
HEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP
PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGNAPASRGLPTT
TQRVGSECPDRLAMDFGGAGAAQQGLTDSCQSGGVPTAVQNLAPRAAVAAAAPRAVAPYK
YASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHS
NLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVAAATS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgcggccagcagctaccccatggcctccctgtacgtgggcgacctgcactcg
gacgtcaccgaggccatgctgtacgaaaagttcagccccgcggggcctgtgctgtccatc
cgggtctgccgcgatatgatcacccgccgctccctgggctatgcctacgtcaacttccag
cagccggccgacgctgagcgggctttggacaccatgaactttgatgtgattaagggaaag
ccaatccgcatcatgtggtctcagagggatccctctttgagaaaatctggtgtgggaaat
gtcttcatcaagaacctggacaaatctatagataacaaggcactttatgatactttttct
gcttttggaaacattctgtcctgcaaggtggtgtgtgatgagaacggctctaagggttat
gcatttgtccacttcgagacccaagaggctgccgacaaggccatcgagaagatgaatggc
atgctcctcaatgaccgcaaagtatttgtgggcagattcaagtctcgcaaagagcgggaa
gctgagctgggagccaaagccaaggaattcaccaatgtttatataaaaaactttggggaa
gaggtggatgatgagagtctgaaagagctattcagtcagtttggtaagaccctaagtgtc
aaggtgatgagagatcccagtgggaaatccaaaggctttggctttgtgagttacgaaaaa
cacgaggatgccaataaggctgtggaagagatgaatggaaaagaaataagtggtaaaatc
atatttgtaggccgtgcacaaaagaaagtagaacggcaggcagagttaaaacggaaattt
gagcagctgaaacaggagagaattagtcgatatcagggggtgaatctctacattaagaac
ttggatgacactattgatgatgagaaattaaggaaagaattttctccttttggatcaatt
accagtgctaaggtaatgctggaggatggaagaagcaaagggtttggcttcgtctgcttc
tcatctcccgaagaggcaaccaaagcagtcactgagatgaatggacgcattgtgggctcc
aagccactatatgttgccctggcccagaggaaggaagagagaaaggctcatctgaccaac
cagtatatgcaacgagtggctggaatgagagcacttcctgccaatgccatcttaaatcag
ttccagcctgcggcgggtggctacttcgtgccagcagtcccacaggctcagggaaggcct
ccatattatacacctaaccagttagcgcagatgaggcctaatccacgctggcagcaaggt
gggagacctcaaggcttccagggaatgccaagtgctatacgccagtctgggcctcgtcca
actcttcgccatctggctccaactggtaatgctccggcctctcgtggcctccctactacc
actcagagagtcgggtctgagtgcccggaccgcttggctatggactttggtggggctggt
gccgcccagcaagggctgactgacagctgccagtctggaggcgttcccacagctgtgcag
aacttagcgccacgcgctgctgttgccgctgctgctccccgggctgttgccccctacaaa
tacgcctccagtgtccgcagccctcatcctgccatacagcctctgcaggcaccccagcct
gcggtccatgtgcaggggcaggagccactgactgcctccatgctggctgcagcacccccc
caggaacagaagcagatgctgggagaacgcttgttcccactcatccaaacaatgcattca
aacttggctgggaagatcacgggaatgctgctggagattgacaactctgagctgctgcac
atgttagagtcccccgagtctctccgctccaaggtagatgaagctgtagcagttctacag
gctcatcatgccaagaaagaagctgcccagaaggtgggcgctgttgctgctgctacctct
tag
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