Rhinopithecus roxellana (golden snub-nosed monkey): 104655242
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Entry
104655242 CDS
T03989
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X2
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro04066
HIF-1 signaling pathway
rro04137
Mitophagy - animal
rro04140
Autophagy - animal
rro04148
Efferocytosis
rro04659
Th17 cell differentiation
rro04919
Thyroid hormone signaling pathway
rro05167
Kaposi sarcoma-associated herpesvirus infection
rro05200
Pathways in cancer
rro05205
Proteoglycans in cancer
rro05208
Chemical carcinogenesis - reactive oxygen species
rro05211
Renal cell carcinoma
rro05230
Central carbon metabolism in cancer
rro05231
Choline metabolism in cancer
rro05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
104655242 (HIF1A)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104655242 (HIF1A)
04137 Mitophagy - animal
104655242 (HIF1A)
04148 Efferocytosis
104655242 (HIF1A)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
104655242 (HIF1A)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
104655242 (HIF1A)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
104655242 (HIF1A)
05205 Proteoglycans in cancer
104655242 (HIF1A)
05208 Chemical carcinogenesis - reactive oxygen species
104655242 (HIF1A)
05230 Central carbon metabolism in cancer
104655242 (HIF1A)
05231 Choline metabolism in cancer
104655242 (HIF1A)
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
104655242 (HIF1A)
09162 Cancer: specific types
05211 Renal cell carcinoma
104655242 (HIF1A)
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
104655242 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rro03000
]
104655242 (HIF1A)
Transcription factors [BR:
rro03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
104655242 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
DDRGK
Motif
Other DBs
NCBI-GeneID:
104655242
NCBI-ProteinID:
XP_010352951
UniProt:
A0A2K6N891
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All DBs
Position
5:complement(91367133..91419456)
Genome browser
AA seq
826 aa
AA seq
DB search
MEGAGGANDKKKISSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASVM
RLTISYLRVRKLLDAGDLDIEDEMKAQMNCFYLKALDGFVMVLTDDGDMIYISDNVNKYM
GLTQFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGR
TMNIKSATWKVLHCTGHIHVYDTNSNQPQCGYKKPPMTCLVLICEPIPHPSNIEIPLDSK
TFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQV
TTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVSGIIQHDLIFSLQQTECV
LKPVESSDMKMTQLFTKVESEDTSSLFDKLKKEPDALTLLAPAAGDTIISLDFGSNDTET
DDQQLEEVPLYNDVMLPSSNEKLQNMNLAMSPLPTSETPKPLRSSADPALNQEVALKLEP
NPESLELSFTMPQIQDQPPSPSDGSTRQSSPEPNSPSEYCFYVDSDMVNEFKLELVEKLF
AEDTEAKNPFSTQDTDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSASPESASPQSTVT
VFQQTQIQEPTANVTTTTATTDELKTVTKDRMEDIKILTASPSSTHIHKETTSATSSPYR
DTQSRTASPNRPGKGVIEQTEKSHPRSPNVLSVALSQRTTIPEEELNPKILALQNAQRKR
KMEHDGSLFQAVGIGTLLQQPDDHAATTSLSWKRVKGCKSSEQNGMEQKTIILIPSDLAC
RLLGQSMDESGLPQLTSYDCEVNAPIQGSRNLLQGEELLRALDQVN
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgccggcggcgcgaacgacaagaaaaagataagttctgaacgtcgaaaagaa
aagtctcgagatgcagccagatctcggcgaagtaaagaatctgaagttttttatgagctt
gctcatcagttgccacttccacataatgtgagctcgcatcttgataaggcctctgttatg
aggcttaccatcagctatttgcgtgtgaggaaacttctggatgctggtgatttggatatt
gaagatgaaatgaaagcacaaatgaattgcttttatttgaaagccttggatggttttgtt
atggttctcacagatgatggtgacatgatttacatttctgataatgtgaacaaatacatg
ggattaactcagtttgaactaactggacacagtgtgtttgattttactcatccatgtgac
catgaggaaatgagagaaatgcttacacacagaaatggccctgtgaaaaagggtaaagaa
caaaacacacagcgaagcttttttctcagaatgaagtgtaccctaactagccgaggaaga
actatgaacataaagtctgcaacatggaaggtattgcactgcacaggccatattcacgta
tatgataccaacagtaaccaacctcagtgtggatataagaaaccacctatgacctgcttg
gttctgatttgtgaacccattcctcacccatcaaatattgaaattcctttagatagcaag
acttttctcagtcgacacagcctggatatgaaattttcttattgtgacgaaagaattacc
gaattgatgggatatgagccagaagaacttttaggccgctcaatttatgaatattatcat
gctttggactctgatcatctgaccaaaactcatcatgatatgtttactaaaggacaagtc
accacaggacagtacaggatgcttgccaaaagaggtggatatgtctgggttgaaactcaa
gcaactgttatatataacaccaagaactctcaaccacagtgcattgtatgtgtgaattat
gttgtgagtggtattattcagcacgacttgattttctcccttcaacaaacagaatgtgtc
cttaaaccggttgaatcttcagatatgaaaatgactcagctattcaccaaagttgaatca
gaagatacaagtagcctctttgacaaacttaagaaggaacctgatgctttaactttgctg
gccccagccgctggagacacaatcatatctttagattttggcagcaatgacacagaaact
gatgaccagcaacttgaggaagtaccattgtataatgatgtaatgcttccctcatccaac
gaaaaattacagaatatgaatttggcaatgtctccattacccacctctgaaacgccaaag
ccacttcgaagtagtgctgaccctgcactcaatcaagaagttgcattaaaattagaacca
aatccagagtcactggaactttcttttaccatgccccaaattcaggatcagccacctagt
ccttctgatggaagcactagacaaagttcacctgagcctaatagtcccagtgaatattgt
ttttatgtggatagtgatatggtcaatgaattcaagttggaattggtagaaaaacttttt
gctgaagacacagaagcaaagaacccattttccactcaggacacagatttagacttggag
atgttagctccctatatcccaatggatgatgacttccagttacgttccttcgatcagttg
tcaccattagaaagcagttccgcaagccctgaaagcgcaagtcctcaaagcacagttaca
gtattccagcagactcaaatacaagaacctactgctaatgtcaccactaccactgccacc
actgatgaattaaaaacagtgacaaaagaccgtatggaagacattaaaatactgactgca
tctccatcttctacccacatacataaagaaactactagtgccacatcatcaccttataga
gatactcaaagtcggacagcctcaccaaacagaccaggaaaaggagtcatagaacagaca
gaaaaatctcatccaagaagccctaacgtgttatctgtcgctttgagtcaaagaactaca
attcctgaggaagaactaaatccaaagatactagctttgcagaatgctcagagaaagcga
aaaatggaacatgatggttcactttttcaagcagtaggaattggaacattattacagcag
ccagacgatcatgcagctactacatcactttcttggaaacgtgtaaaaggatgcaaatct
agtgaacagaatggaatggagcaaaagacaattattttaataccctctgatttagcatgt
agactgctggggcaatcaatggatgaaagtggattaccacagctgaccagttatgattgt
gaagttaatgctcctatacaaggcagcagaaacctactgcagggtgaagaattactcaga
gctttggatcaagttaactga
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